ФЭНДОМ


   LOCUS       NC_002488            2679306 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Xylella fastidiosa 9a5c, complete genome.
   ACCESSION   NC_002488
   VERSION     NC_002488.3  GI:57014152
   KEYWORDS    .
   SOURCE      Xylella fastidiosa 9a5c
     ORGANISM  Xylella fastidiosa 9a5c
               Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
               Xanthomonadaceae; Xylella.
   REFERENCE   1  (bases 1 to 2679306)
     AUTHORS   Simpson,A.J.G., Reinach,F.C., Arruda,P., Abreu,F.A., Acencio,M.,
               Alvarenga,R., Alves,L.M.C., Araya,J.E., Baia,G.S., Baptista,C.S.,
               Barros,M.H., Bonaccorsi,E.D., Bordin,S., Bove,J.M., Briones,M.R.S.,
               Bueno,M.R.P., Camargo,A.A., Camargo,L.E.A., Carraro,D.M.,
               Carrer,H., Colauto,N.B., Colombo,C., Costa,F.F., Costa,M.C.R.,
               Costa-Neto,C.M., Coutinho,L.L., Cristofani,M., Dias-Neto,E.,
               Docena,C., El-Dorry,H., Facincani,A.P., Ferreira,A.J.S.,
               Ferreira,V.C.A., Ferro,J.A., Fraga,J.S., Franca,S.C., Franco,M.C.,
               Frohme,M., Furlan,L.R., Garnier,M., Goldman,G.H., Goldman,M.H.S.,
               Gomes,S.L., Gruber,A., Ho,P.L., Hoheisel,J.D., Junqueira,M.L.,
               Kemper,E.L., Kitajima,J.P., Krieger,J.E., Kuramae,E.E., Laigret,F.,
               Lambais,M.R., Leite,L.C.C., Lemos,E.G.M., Lemos,M.V.F., Lopes,S.A.,
               Lopes,C.R., Machado,J.A., Machado,M.A., Madeira,A.M.B.N.,
               Madeira,H.M.F., Marino,C.L., Marques,M.V., Martins,E.A.L.,
               Martins,E.M.F., Matsukuma,A.Y., Menck,C.F.M., Miracca,E.C.,
               Miyaki,C.Y., Monteiro-Vitorello,C.B., Moon,D.H., Nagai,M.A.,
               Nascimento,A.L.T.O., Netto,L.E.S., Nhani,A. Jr., Nobrega,F.G.,
               Nunes,L.R., Oliveira,M.A., de Oliveira,M.C., de Oliveira,R.C.,
               Palmieri,D.A., Paris,A., Peixoto,B.R., Pereira,G.A.G., Pereira,H.A.
               Jr., Pesquero,J.B., Quaggio,R.B., Roberto,P.G., Rodrigues,V., de M.
               Rosa,A.J., de Rosa,V.E. Jr., de Sa,R.G., Santelli,R.V.,
               Sawasaki,H.E., da Silva,A.C.R., da Silva,F.R., da Silva,A.M.,
               Silva,W.A. Jr., da Silveira,J.F., Silvestri,M.L.Z., Siqueira,W.J.,
               de Souza,A.A., de Souza,A.P., Terenzi,M.F., Truffi,D., Tsai,S.M.,
               Tsuhako,M.H., Vallada,H., Van Sluys,M.A., Verjovski-Almeida,S.,
               Vettore,A.L., Zago,M.A., Zatz,M., Meidanis,J. and Setubal,J.C.
     TITLE     The genome sequence of the plant pathogen Xylella fastidiosa. The
               Xylella fastidiosa Consortium of the Organization for Nucleotide
               Sequencing and Analysis
     JOURNAL   Nature 406 (6792), 151-157 (2000)
      PUBMED   10910347
   REFERENCE   2  (bases 1 to 2679306)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (02-OCT-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2679306)
     AUTHORS   Simpson,A.J.G., Reinach,F.C., Arruda,P., Abreu,F.A., Acencio,M.,
               Alvarenga,R., Alves,L.M.C., Araya,J.E., Baia,G.S., Baptista,C.S.,
               Barros,M.H., Bonaccorsi,E.D., Bordin,S., Bove,J.M., Briones,M.R.S.,
               Bueno,M.R.P., Camargo,A.A., Camargo,L.E.A., Carraro,D.M.,
               Carrer,H., Colauto,N.B., Colombo,C., Costa,F.F., Costa,M.C.R.,
               Costa-Neto,C.M., Coutinho,L.L., Cristofani,M., Dias-Neto,E.,
               Docena,C., El-Dorry,H., Facincani,A.P., Ferreira,A.J.S.,
               Ferreira,V.C.A., Ferro,J.A., Fraga,J.S., Franca,S.C., Franco,M.C.,
               Frohme,M., Furlan,L.R., Garnier,M., Goldman,G.H., Goldman,M.H.S.,
               Gomes,S.L., Gruber,A., Ho,P.L., Hoheisel,J.D., Junqueira,M.L.,
               Kemper,E.L., Kitajima,J.P., Krieger,J.E., Kuramae,E.E., Laigret,F.,
               Lambais,M.R., Leite,L.C.C., Lemos,E.G.M., Lemos,M.V.F., Lopes,S.A.,
               Lopes,C.R., Machado,J.A., Machado,M.A., Madeira,A.M.B.N.,
               Madeira,H.M.F., Marino,C.L., Marques,M.V., Martins,E.A.L.,
               Martins,E.M.F., Matsukuma,A.Y., Menck,C.F.M., Miracca,E.C.,
               Miyaki,C.Y., Monteiro-Vitorello,C.B., Moon,D.H., Nagai,M.A.,
               Nascimento,A.L.T.O., Netto,L.E.S., Nhani,A. Jr., Nobrega,F.G.,
               Nunes,L.R., Oliveira,M.A., de Oliveira,M.C., de Oliveira,R.C.,
               Palmieri,D.A., Paris,A., Peixoto,B.R., Pereira,G.A.G., Pereira,H.A.
               Jr., Pesquero,J.B., Quaggio,R.B., Roberto,P.G., Rodrigues,V., de M.
               Rosa,A.J., de Rosa,V.E. Jr., de Sa,R.G., Santelli,R.V.,
               Sawasaki,H.E., da Silva,A.C.R., da Silva,F.R., da Silva,A.M.,
               Silva,W.A. Jr., da Silveira,J.F., Silvestri,M.L.Z., Siqueira,W.J.,
               de Souza,A.A., de Souza,A.P., Terenzi,M.F., Truffi,D., Tsai,S.M.,
               Tsuhako,M.H., Vallada,H., Van Sluys,M.A., Verjovski-Almeida,S.,
               Vettore,A.L., Zago,M.A., Zatz,M., Meidanis,J. and Setubal,J.C.
     TITLE     Direct Submission
     JOURNAL   Submitted (02-JUN-2000) Organization for Nucleotide Sequencing and
               Analysis, Bioinformatics Lab - IC/Unicamp, C.P. 6176, Campinas, SP
               13083-970, Brazil
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE003849.
               On Jan 4, 2005 this sequence version replaced gi:55294525.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
20869 20945 - 77 57014152 XFt01 - 16</sub> Met tRNA
62407 62483 + 77 57014152 XFt02 - 11</sub> Arg tRNA
66558 68102 + 1545 57014152 XFr01 - 16S ribosomal RNA
68209 68284 + 76 57014152 XFt03 - 02</sub> Ala tRNA
68298 68374 + 77 57014152 XFt04 - 14</sub> Ile tRNA
68568 71449 + 2882 57014152 XFr02 - 23S ribosomal RNA
71586 71703 + 118 57014152 XFr03 - 5S ribosomal RNA
123996 124088 + 93 57014152 XFt05 - 08</sub> Ser tRNA
172274 173818 + 1545 57014152 XFr04 - 16S ribosomal RNA
173925 174000 + 76 57014152 XFt06 - 02</sub> Ala tRNA
174014 174090 + 77 57014152 XFt07 - 14</sub> Ile tRNA
174284 177165 + 2882 57014152 XFr05 - 23S ribosomal RNA
177302 177419 + 118 57014152 XFr06 - 5S ribosomal RNA
224438 224513 - 76 57014152 XFt08 - 02</sub> Ala tRNA
236040 236114 - 75 57014152 XFt09 - 04</sub> Glu tRNA
242842 242918 + 77 57014152 XFt10 - 16</sub> Met tRNA
308643 308718 + 76 57014152 XFt11 - 17</sub> Phe tRNA
319058 319142 + 85 57014152 XFt12 - 15</sub> Leu tRNA
405760 405834 - 75 57014152 XFt13 - 05</sub> Gln tRNA
405880 405956 - 77 57014152 XFt14 - 16</sub> Met tRNA
486925 487001 + 77 57014152 XFt15 - 07</sub> Asn tRNA
615886 615973 - 88 57014152 XFt16 - 08</sub> Ser tRNA
649104 649178 + 75 57014152 XFt17 - 13</sub> Val tRNA
699322 699398 + 77 57014152 XFt18 - 03</sub> Pro tRNA
732074 732147 - 74 57014152 XFt19 - 01</sub> Gly tRNA
816524 816600 - 77 57014152 XFt20 - 03</sub> Pro tRNA
926649 926723 + 75 57014152 XFt21 - 13</sub> Val tRNA
1017853 1017939 - 87 57014152 XFt22 - 15</sub> Leu tRNA
1018069 1018144 - 76 57014152 XFt23 - 04</sub> Glu tRNA
1018198 1018273 - 76 57014152 XFt24 - 02</sub> Ala tRNA
1078829 1078913 - 85 57014152 XFt25 - 15</sub> Leu tRNA
1131233 1131319 - 87 57014152 XFt26 - 15</sub> Leu tRNA
1135741 1135824 - 84 57014152 XFt27 - 15</sub> Leu tRNA
1142842 1142916 + 75 57014152 XFt28 - 13</sub> Val tRNA
1142947 1143023 + 77 57014152 XFt29 - 06</sub> Asp tRNA
1191242 1191317 - 76 57014152 XFt30 - 10</sub> Lys tRNA
1631333 1631409 + 77 57014152 XFt31 - 11</sub> Arg tRNA
1638644 1638719 + 76 57014152 XFt32 - 01</sub> Gly tRNA
1707512 1707587 - 76 57014152 XFt33 - 12</sub> Thr tRNA
1720231 1720323 - 93 57014152 XFt34 - 08</sub> Ser tRNA
1776435 1776510 + 76 57014152 XFt35 - 10</sub> Lys tRNA
2004768 2004841 + 74 57014152 XFt36 - 19</sub> Cys tRNA
2047010 2047100 - 91 57014152 XFt37 - 08</sub> Ser tRNA
2193930 2194005 - 76 57014152 XFt38 - 01</sub> Gly tRNA
2295154 2295229 - 76 57014152 XFt39 - 12</sub> Thr tRNA
2459885 2459962 + 78 57014152 XFt40 - 11</sub> Arg tRNA
2524115 2524190 - 76 57014152 XFt41 - 20</sub> Trp tRNA
2525541 2525616 - 76 57014152 XFt42 - 12</sub> Thr tRNA
2525659 2525732 - 74 57014152 XFt43 - 01</sub> Gly tRNA
2525766 2525851 - 86 57014152 XFt44 - 18</sub> Tyr tRNA
2529603 2529679 - 77 57014152 XFt45 - 05</sub> Gln tRNA
2602997 2603351 + 355 57014152 XFs01 - tmRNA
2652606 2652682 + 77 57014152 XFt46 - 03</sub> Pro tRNA
2652744 2652822 + 79 57014152 XFt47 - 11</sub> Arg tRNA
2652862 2652938 + 77 57014152 XFt48 - 09</sub> His tRNA
2653049 2653124 + 76 57014152 XFt49 - 10</sub> Lys tRNA