LOCUS NC_003454 2174500 bp DNA circular BCT 02-DEC-2005
DEFINITION Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete
genome.
ACCESSION NC_003454
VERSION NC_003454.1 GI:19703352
KEYWORDS .
SOURCE Fusobacterium nucleatum subsp. nucleatum ATCC 25586
ORGANISM Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Bacteria; Fusobacteria; Fusobacterales; Fusobacteriaceae;
Fusobacterium.
REFERENCE 1 (bases 1 to 2174500)
AUTHORS Kapatral,V., Anderson,I., Ivanova,N., Reznik,G., Los,T.,
Lykidis,A., Bhattacharyya,A., Bartman,A., Gardner,W., Grechkin,G.,
Zhu,L., Vasieva,O., Chu,L., Kogan,Y., Chaga,O., Goltsman,E.,
Bernal,A., Larsen,N., D'Souza,M., Walunas,T., Pusch,G.,
Haselkorn,R., Fonstein,M., Kyrpides,N. and Overbeek,R.
TITLE Genome sequence and analysis of the oral bacterium Fusobacterium
nucleatum strain ATCC 25586
JOURNAL J. Bacteriol. 184 (7), 2005-2018 (2002)
PUBMED 11889109
REFERENCE 2 (bases 1 to 2174500)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2174500)
AUTHORS Kapatral,V., Anderson,I., Ivanova,N., Reznik,G., Los,T.,
Lykidis,A., Bhattacharayya,A., Bartman,A., Gardner,W., Grechkin,G.,
Zhu,L., Chu,L., Kogan,Y., Chaga,O., Goltsman,E., Bernal,A.,
Larsen,N., D'Souza,M., Walunas,T., Pusch,G.D., Haselkorn,R.,
Fonstein,M., Kyrpides,N. and Overbeek,R.
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2002) Integrated Genomics, 2201 W. Campbell Park
Drive, Chicago, IL 60612, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE009951.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 85236 | 85313 | - | 78 | 19703352 | FNt01 | - | 06 Asp tRNA |
| 85322 | 85397 | - | 76 | 19703352 | FNt02 | - | 13 Val tRNA |
| 85409 | 85484 | - | 76 | 19703352 | FNt03 | - | 17 Phe tRNA |
| 85498 | 85581 | - | 84 | 19703352 | FNt04 | - | 08 Ser tRNA |
| 85583 | 85657 | - | 75 | 19703352 | FNt05 | - | 04 Glu tRNA |
| 85674 | 85751 | - | 78 | 19703352 | FNt06 | - | 16 Met tRNA |
| 85760 | 85836 | - | 77 | 19703352 | FNt07 | - | 11 Arg tRNA |
| 85845 | 85920 | - | 76 | 19703352 | FNt08 | - | 10 Lys tRNA |
| 85930 | 86005 | - | 76 | 19703352 | FNt09 | - | 01 Gly tRNA |
| 86029 | 86105 | - | 77 | 19703352 | FNt10 | - | 16 Met tRNA |
| 86113 | 86200 | - | 88 | 19703352 | FNt11 | - | 15 Leu tRNA |
| 255127 | 255201 | - | 75 | 19703352 | FNt12 | - | 05 Gln tRNA |
| 255208 | 255284 | - | 77 | 19703352 | FNt13 | - | 03 Pro tRNA |
| 259676 | 259752 | - | 77 | 19703352 | FNt14 | - | 16 Met tRNA |
| 259757 | 259833 | - | 77 | 19703352 | FNt15 | - | 02 Ala tRNA |
| 259852 | 259927 | - | 76 | 19703352 | FNt16 | - | 01 Gly tRNA |
| 259945 | 260028 | - | 84 | 19703352 | FNt17 | - | 15 Leu tRNA |
| 260044 | 260119 | - | 76 | 19703352 | FNt18 | - | 12 Thr tRNA |
| 260128 | 260204 | - | 77 | 19703352 | FNt19 | - | 06 Asp tRNA |
| 260215 | 260290 | - | 76 | 19703352 | FNt20 | - | 13 Val tRNA |
| 260295 | 260369 | - | 75 | 19703352 | FNt21 | - | 04 Glu tRNA |
| 260377 | 260452 | - | 76 | 19703352 | FNt22 | - | 10 Lys tRNA |
| 260460 | 260535 | - | 76 | 19703352 | FNt23 | - | 01 Gly tRNA |
| 260587 | 260660 | - | 74 | 19703352 | FNt24 | - | 19 Cys tRNA |
| 260676 | 260751 | - | 76 | 19703352 | FNt25 | - | 17 Phe tRNA |
| 260770 | 260846 | - | 77 | 19703352 | FNt26 | - | 06 Asp tRNA |
| 260857 | 260932 | - | 76 | 19703352 | FNt27 | - | 13 Val tRNA |
| 448158 | 451028 | - | 2871 | 19703352 | FNr01 | - | LSU Ribosomal RNA |
| 448247 | 448362 | - | 116 | 19703352 | FNr02 | - | 5S Ribosomal RNA |
| 451529 | 453030 | - | 1502 | 19703352 | FNr03 | - | SSU Ribosomal RNA |
| 461093 | 461167 | - | 75 | 19703352 | FNt28 | - | 05 Gln tRNA |
| 461208 | 461291 | - | 84 | 19703352 | FNt29 | - | 15 Leu tRNA |
| 461304 | 461379 | - | 76 | 19703352 | FNt30 | - | 10 Lys tRNA |
| 461383 | 461458 | - | 76 | 19703352 | FNt31 | - | 09 His tRNA |
| 461469 | 461544 | - | 76 | 19703352 | FNt32 | - | 01 Gly tRNA |
| 461552 | 461628 | - | 77 | 19703352 | FNt33 | - | 03 Pro tRNA |
| 526875 | 529745 | - | 2871 | 19703352 | FNr04 | - | LSU Ribosomal RNA |
| 526964 | 527079 | - | 116 | 19703352 | FNr05 | - | 5S Ribosomal RNA |
| 530150 | 530226 | - | 77 | 19703352 | FNt34 | - | 02 Ala tRNA |
| 530230 | 530306 | - | 77 | 19703352 | FNt35 | - | 14 Ile tRNA |
| 530422 | 531923 | - | 1502 | 19703352 | FNr06 | - | SSU Ribosomal RNA |
| 549945 | 550020 | - | 76 | 19703352 | FNt36 | - | 20 Trp tRNA |
| 729878 | 731379 | + | 1502 | 19703352 | FNr07 | - | SSU Ribosomal RNA |
| 731537 | 734463 | + | 2927 | 19703352 | FNr08 | - | LSU Ribosomal RNA |
| 734512 | 734627 | + | 116 | 19703352 | FNr09 | - | 5S Ribosomal RNA |
| 734634 | 734709 | + | 76 | 19703352 | FNt37 | - | 07 Asn tRNA |
| 755223 | 755307 | - | 85 | 19703352 | FNt38 | - | 18 Tyr tRNA |
| 755324 | 755398 | - | 75 | 19703352 | FNt39 | - | 04 Glu tRNA |
| 755401 | 755476 | - | 76 | 19703352 | FNt40 | - | 12 Thr tRNA |
| 960772 | 960860 | - | 89 | 19703352 | FNt41 | - | 08 Ser tRNA |
| 960884 | 960967 | - | 84 | 19703352 | FNt42 | - | 08 Ser tRNA |
| 985065 | 985141 | - | 77 | 19703352 | FNt43 | - | 11 Arg tRNA |
| 1072227 | 1073728 | + | 1502 | 19703352 | FNr10 | - | SSU Ribosomal RNA |
| 1073886 | 1076812 | + | 2927 | 19703352 | FNr11 | - | LSU Ribosomal RNA |
| 1076861 | 1076976 | + | 116 | 19703352 | FNr12 | - | 5S Ribosomal RNA |
| 1076983 | 1077058 | + | 76 | 19703352 | FNt44 | - | 07 Asn tRNA |
| 1081920 | 1081996 | + | 77 | 19703352 | FNt45 | - | 11 Arg tRNA |
| 1082060 | 1082136 | + | 77 | 19703352 | FNt46 | - | 11 Arg tRNA |
| 1082145 | 1082231 | + | 87 | 19703352 | FNt47 | - | 15 Leu tRNA |
| 2043736 | 2046606 | - | 2871 | 19703352 | FNr13 | - | LSU Ribosomal RNA |
| 2043825 | 2043940 | - | 116 | 19703352 | FNr14 | - | 5S Ribosomal RNA |
| 2047107 | 2048608 | - | 1502 | 19703352 | FNr15 | - | SSU Ribosomal RNA |