ФЭНДОМ


   LOCUS       NC_003919            5175554 bp    DNA     circular BCT 17-JAN-2006
   DEFINITION  Xanthomonas axonopodis pv. citri str. 306, complete genome.
   ACCESSION   NC_003919
   VERSION     NC_003919.1  GI:21240774
   KEYWORDS    .
   SOURCE      Xanthomonas axonopodis pv. citri str. 306
     ORGANISM  Xanthomonas axonopodis pv. citri str. 306
               Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
               Xanthomonadaceae; Xanthomonas.
   REFERENCE   1  (bases 1 to 5175554)
     AUTHORS   da Silva,A.C.R., Ferro,J.A., Reinach,F.C., Farah,C.S., Furlan,L.R.,
               Quaggio,R.B., Monteiro-Vitorello,C.B., Van Sluys,M.A., Almeida,N.F.
               Jr., Alves,L.M.C., do Amaral,A.M., Bertolini,M.C., Camargo,L.E.A.,
               Camarotte,G., Cannavan,F., Cardozo,J., Chambergo,F., Ciapina,L.P.,
               Cicarelli,R.M.B., Coutinho,L.L., Cursino-Santos,J.R., El-Dorry,H.,
               Faria,J.B., Ferreira,A.J.S., Ferreira,R.C.C., Ferro,M.I.T.,
               Formighieri,E.F., Franco,M.C., Greggio,C.C., Gruber,A.,
               Katsuyama,A.M., Kishi,L.T., Leite,R.P. Jr., Lemos,E.G.M.,
               Lemos,M.V.F., Locali,E.C., Machado,M.A., Madeira,A.M.B.N.,
               Martinez-Rossi,N.M., Martins,E.C., Meidanis,J., Menck,C.F.M.,
               Miyaki,C.Y., Moon,D.H., Moreira,L.M., Novo,M.T.M., Okura,V.K.,
               Oliveira,M.C., Oliveira,V.R., Pereira,H.A. Jr., Rossi,A.,
               Sena,J.A.D., Silva,C., de Souza,R.F., Spinola,L.A.F., Takita,M.A.,
               Tamura,R.E., Teixeira,E.C., Tezza,R.I.D., Trindade dos Santos,M.,
               Truffi,D., Tsai,S.M., White,F.F., Setubal,J.C. and Kitajima,J.P.
     TITLE     Comparison of the genomes of two Xanthomonas pathogens with
               differing host specificities
     JOURNAL   Nature 417 (6887), 459-463 (2002)
      PUBMED   12024217
   REFERENCE   2  (bases 1 to 5175554)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (29-MAY-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5175554)
     AUTHORS   da Silva,A.C.R., Ferro,J.A., Reinach,F.C., Farah,C.S., Furlan,L.R.,
               Quaggio,R.B., Monteiro-Vitorello,C.B., Van Sluys,M.A., Almeida,N.F.
               Jr., Alves,L.M.C., do Amaral,A.M., Bertolini,M.C., Camargo,L.E.A.,
               Camarotte,G., Cannavan,F., Cardozo,J., Chambergo,F., Ciapina,L.P.,
               Cicarelli,R.M.B., Coutinho,L.L., Cursino-Santos,J.R., El-Dorry,H.,
               Faria,J.B., Ferreira,A.J.S., Ferreira,R.C.C., Ferro,M.I.T.,
               Formighieri,E.F., Franco,M.C., Greggio,C.C., Gruber,A.,
               Katsuyama,A.M., Kishi,L.T., Leite,R.P. Jr., Lemos,E.G.M.,
               Lemos,M.V.F., Locali,E.C., Machado,M.A., Madeira,A.M.B.N.,
               Martinez-Rossi,N.M., Martins,E.C., Meidanis,J., Menck,C.F.M.,
               Miyaki,C.Y., Moon,D.H., Moreira,L.M., Novo,M.T.M., Okura,V.K.,
               Oliveira,M.C., Oliveira,V.R., Pereira,H.A. Jr., Rossi,A.,
               Sena,J.A.D., Silva,C., de Souza,R.F., Spinola,L.A.F., Takita,M.A.,
               Tamura,R.E., Teixeira,E.C., Tezza,R.I.D., Trindade dos Santos,M.,
               Truffi,D., Tsai,S.M., White,F.F., Setubal,J.C. and Kitajima,J.P.
     TITLE     Direct Submission
     JOURNAL   Submitted (28-NOV-2001) Departmento de Bioquimica, Universidade de
               Sao Paulo, Av. Prof. Lineu Prestes 748, Sao Paulo, SP 05508-900,
               Brazil
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE008923.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
462225 462301 + 77 21240774 XAC0391 - 11</sub> Arg tRNA
577683 577757 - 75 21240774 XAC0489 - 05</sub> Gln tRNA
577810 577886 - 77 21240774 XAC0490 - 16</sub> Met tRNA
912073 912431 + 359 21240774 XAC0767 - RNA subunit of RNase P
1111817 1111893 + 77 21240774 XAC0949 - 05</sub> Gln tRNA
1115719 1115804 + 86 21240774 XAC0954 - 18</sub> Tyr tRNA
1115834 1115907 + 74 21240774 XAC0955 - 01</sub> Gly tRNA
1115941 1116016 + 76 21240774 XAC0956 - 12</sub> Thr tRNA
1117360 1117435 + 76 21240774 XAC0958 - 20</sub> Trp tRNA
1209044 1209120 + 77 21240774 XAC1048 - 03</sub> Pro tRNA
1209163 1209239 + 77 21240774 XAC1049 - 11</sub> Arg tRNA
1209272 1209348 + 77 21240774 XAC1050 - 09</sub> His tRNA
1229179 1229254 + 76 21240774 XAC1073 - 10</sub> Lys tRNA
1231193 1231277 + 85 21240774 XAC1076 - 15</sub> Leu tRNA
1238015 1238089 + 75 21240774 XAC1082 - 13</sub> Val tRNA
1238118 1238194 + 77 21240774 XAC1083 - 06</sub> Asp tRNA
1238289 1238365 + 77 21240774 XAC1084 - 06</sub> Asp tRNA
1246283 1246373 + 91 21240774 XAC1092 - 08</sub> Ser tRNA
1259581 1259673 - 93 21240774 XAC1108 - 08</sub> Ser tRNA
1284101 1284175 + 75 21240774 XAC1134 - 13</sub> Val tRNA
1435449 1435524 + 76 21240774 XAC1257 - 12</sub> Thr tRNA
1670926 1671012 - 87 21240774 XAC1447 - 15</sub> Leu tRNA
1745670 1746069 - 400 21240774 XAC1511 - tmRNA
1809135 1809221 - 87 21240774 XAC1565 - 15</sub> Leu tRNA
1908540 1908629 + 90 21240774 XAC1656 - 08</sub> Ser tRNA
2004911 2005003 + 93 21240774 XAC1744 - 08</sub> Ser tRNA
2011484 2011560 - 77 21240774 XAC1750 - 11</sub> Arg tRNA
2011656 2011732 - 77 21240774 XAC1751 - 11</sub> Arg tRNA
2052317 2052391 - 75 21240774 XAC1782 - 04</sub> Glu tRNA
2083089 2083165 + 77 21240774 XAC1809 - 11</sub> Arg tRNA
2403460 2403546 + 87 21240774 XAC2056 - 15</sub> Leu tRNA
2404386 2404461 - 76 21240774 XAC2058 - 04</sub> Glu tRNA
2404509 2404584 - 76 21240774 XAC2059 - 02</sub> Ala tRNA
2405343 2405418 - 76 21240774 XAC2060 - 04</sub> Glu tRNA
2405465 2405540 - 76 21240774 XAC2061 - 02</sub> Ala tRNA
2443358 2443433 + 76 21240774 XAC2094 - 01</sub> Gly tRNA
2443502 2443575 + 74 21240774 XAC2095 - 19</sub> Cys tRNA
2443657 2443732 + 76 21240774 XAC2096 - 01</sub> Gly tRNA
2458841 2458927 - 87 21240774 XAC2104 - 15</sub> Leu tRNA
2733586 2733662 + 77 21240774 XAC2339 - 03</sub> Pro tRNA
2818302 2818377 + 76 21240774 XAC2417 - 02</sub> Ala tRNA
3019036 3019111 - 76 21240774 XAC2560 - 17</sub> Phe tRNA
3047909 3047985 - 77 21240774 XAC2586 - 03</sub> Pro tRNA
3090905 3090979 - 75 21240774 XAC2624 - 13</sub> Val tRNA
3093839 3093915 + 77 21240774 XAC2627 - 07</sub> Asn tRNA
3150311 3150387 - 77 21240774 XAC2690 - 16</sub> Met tRNA
3165494 3165578 - 85 21240774 XAC2705 - 15</sub> Leu tRNA
3689881 3689956 + 76 21240774 XAC3138 - 10</sub> Lys tRNA
3877716 3877789 - 74 21240774 XAC3299 - 01</sub> Gly tRNA
4455088 4455163 - 76 21240774 XAC3786 - 16</sub> Met tRNA
4576439 4576557 - 119 21240774 XAC3892 - SSU 5S ribosomal RNA
4576681 4579561 - 2881 21240774 XAC3893 - SSU 23S ribosomal RNA
4579789 4579865 - 77 21240774 XAC3894 - 14</sub> Ile tRNA
4579884 4579959 - 76 21240774 XAC3895 - 02</sub> Ala tRNA
4580055 4581601 - 1547 21240774 XAC3896 - SSU 16S ribosomal RNA
4659357 4659430 + 74 21240774 XAC3963 - 02</sub> Ala tRNA
4706162 4706237 - 76 21240774 XAC4015 - 12</sub> Thr tRNA
5065681 5065799 - 119 21240774 XAC4287 - SSU 5S ribosomal RNA
5065923 5068803 - 2881 21240774 XAC4288 - SSU 23S ribosomal RNA
5069031 5069107 - 77 21240774 XAC4289 - 14</sub> Ile tRNA
5069126 5069201 - 76 21240774 XAC4290 - 02</sub> Ala tRNA
5069297 5070843 - 1547 21240774 XAC4291 - SSU 16S ribosomal RNA