ФЭНДОМ


   LOCUS       NC_004193            3630528 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Oceanobacillus iheyensis HTE831, complete genome.
   ACCESSION   NC_004193
   VERSION     NC_004193.1  GI:23097455
   KEYWORDS    .
   SOURCE      Oceanobacillus iheyensis HTE831
     ORGANISM  Oceanobacillus iheyensis HTE831
               Bacteria; Firmicutes; Bacillales; Bacillaceae; Oceanobacillus.
   REFERENCE   1  (bases 1 to 3630528)
     AUTHORS   Takami,H., Takaki,Y. and Uchiyama,I.
     TITLE     Genome sequence of Oceanobacillus iheyensis isolated from the Iheya
               Ridge and its unexpected adaptive capabilities to extreme
               environments
     JOURNAL   Nucleic Acids Res. 30 (18), 3927-3935 (2002)
      PUBMED   12235376
   REFERENCE   2
     AUTHORS   Lu,J., Nogi,Y. and Takami,H.
     TITLE     Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely
               halotolerant and alkaliphilic species isolated from a depth of 1050
               m on the Iheya Ridge
     JOURNAL   FEMS Microbiol. Lett. 205 (2), 291-297 (2001)
      PUBMED   11750818
   REFERENCE   3  (bases 1 to 3630528)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3630528)
     AUTHORS   NCBI Microbial Genomes Annotation Project.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-FEB-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
               reference sequence was derived from BA000028.
               COMPLETENESS: full length.
               REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0
               with comparison to original submitter provided annotation.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
21773 21845 + 73 23097455 OB3543 - 11</sub> Arg tRNA
30819 31088 + 270 23097455 OB3544 - signal recognition particle-like scRNA
70197 70273 - 77 23097455 OB3545 - 16</sub> Met tRNA
91493 93058 + 1566 23097455 OB3546 - 16S ribosomal RNA
93292 96213 + 2922 23097455 OB3568 - 23S ribosomal RNA
96347 96462 + 116 23097455 OB3569 - 5S ribosomal RNA
96468 96543 + 76 23097455 OB3547 - 13</sub> Val tRNA
96545 96620 + 76 23097455 OB3570 - 12</sub> Thr tRNA
96669 96744 + 76 23097455 OB3571 - 10</sub> Lys tRNA
96749 96833 + 85 23097455 OB3571.1 - 15</sub> Leu tRNA
96851 96925 + 75 23097455 OB3572 - 01</sub> Gly tRNA
96931 97019 + 89 23097455 OB3573 - 15</sub> Leu tRNA
97023 97099 + 77 23097455 OB3574 - 11</sub> Arg tRNA
97101 97177 + 77 23097455 OB3575 - 03</sub> Pro tRNA
97197 97272 + 76 23097455 OB3576 - 02</sub> Ala tRNA
97474 99039 + 1566 23097455 OB3548 - 16S ribosomal RNA
99273 102194 + 2922 23097455 OB3577 - 23S ribosomal RNA
102328 102443 + 116 23097455 OB3578 - 5S ribosomal RNA
102449 102524 + 76 23097455 OB3549 - 13</sub> Val tRNA
102526 102601 + 76 23097455 OB3579 - 12</sub> Thr tRNA
102650 102725 + 76 23097455 OB3580 - 10</sub> Lys tRNA
102730 102814 + 85 23097455 OB3581 - 15</sub> Leu tRNA
102832 102906 + 75 23097455 OB3582 - 01</sub> Gly tRNA
102912 103000 + 89 23097455 OB3583 - 15</sub> Leu tRNA
103004 103080 + 77 23097455 OB3584 - 11</sub> Arg tRNA
103082 103158 + 77 23097455 OB3585 - 03</sub> Pro tRNA
103178 103253 + 76 23097455 OB3586 - 02</sub> Ala tRNA
103455 105020 + 1566 23097455 OB3550 - 16S ribosomal RNA
105254 108175 + 2922 23097455 OB3587 - 23S ribosomal RNA
108308 108423 + 116 23097455 OB3588 - 5S ribosomal RNA
214375 215940 + 1566 23097455 OB3551 - 16S ribosomal RNA
216167 216243 + 77 23097455 OB3552 - 14</sub> Ile tRNA
216263 216335 + 73 23097455 OB3589 - 02</sub> Ala tRNA
216474 219395 + 2922 23097455 OB3590 - 23S ribosomal RNA
219470 219585 + 116 23097455 OB3591 - 5S ribosomal RNA
219619 219693 + 75 23097455 OB3553 - 07</sub> Asn tRNA
219697 219770 + 74 23097455 OB3592 - 12</sub> Thr tRNA
244280 244354 + 75 23097455 OB3554 - 04</sub> Glu tRNA
244362 244437 + 76 23097455 OB3593 - 13</sub> Val tRNA
244748 244823 + 76 23097455 OB3594 - 12</sub> Thr tRNA
244873 244956 + 84 23097455 OB3595 - 18</sub> Tyr tRNA
244968 245042 + 75 23097455 OB3596 - 05</sub> Gln tRNA
245112 245187 + 76 23097455 OB3596.1 - 10</sub> Lys tRNA
530653 530725 - 73 23097455 OB3555 - 02</sub> Ala tRNA
662215 662289 + 75 23097455 OB3556 - 07</sub> Asn tRNA
662295 662385 + 91 23097455 OB3597 - 08</sub> Ser tRNA
662405 662476 + 72 23097455 OB3598 - 04</sub> Glu tRNA
662500 662576 + 77 23097455 OB3599 - 06</sub> Asp tRNA
662582 662656 + 75 23097455 OB3600 - 05</sub> Gln tRNA
663036 663111 + 76 23097455 OB3601 - 10</sub> Lys tRNA
663116 663199 + 84 23097455 OB3602 - 15</sub> Leu tRNA
669868 669944 + 77 23097455 OB3602.1 - 11</sub> Arg tRNA
669946 670022 + 77 23097455 OB3603 - 03</sub> Pro tRNA
670052 670125 + 74 23097455 OB3604 - 01</sub> Gly tRNA
670131 670207 + 77 23097455 OB3605 - 14</sub> Ile tRNA
670417 671982 + 1566 23097455 OB3557 - 16S ribosomal RNA
672254 675175 + 2922 23097455 OB3606 - 23S ribosomal RNA
675301 675416 + 116 23097455 OB3606.1 - 5S ribosomal RNA
679269 679384 + 116 23097455 OB3558 - 5S ribosomal RNA
679472 679548 + 77 23097455 OB3559 - 16</sub> Met tRNA
679625 679701 + 77 23097455 OB3608 - 06</sub> Asp tRNA
957735 959300 + 1566 23097455 OB3560 - 16S ribosomal RNA
959534 962455 + 2922 23097455 OB3609 - 23S ribosomal RNA
962589 962704 + 116 23097455 OB3610 - 5S ribosomal RNA
962780 962854 + 75 23097455 OB3561 - 07</sub> Asn tRNA
962856 962947 + 92 23097455 OB3611 - 08</sub> Ser tRNA
962957 963031 + 75 23097455 OB3612 - 04</sub> Glu tRNA
963042 963117 + 76 23097455 OB3613 - 13</sub> Val tRNA
963144 963220 + 77 23097455 OB3614 - 16</sub> Met tRNA
963230 963306 + 77 23097455 OB3615 - 06</sub> Asp tRNA
963339 963411 + 73 23097455 OB3616 - 17</sub> Phe tRNA
963427 963510 + 84 23097455 OB3617 - 18</sub> Tyr tRNA
963526 963599 + 74 23097455 OB3618 - 20</sub> Trp tRNA
963605 963677 + 73 23097455 OB3619 - 09</sub> His tRNA
963702 963776 + 75 23097455 OB3620 - 05</sub> Gln tRNA
963779 963853 + 75 23097455 OB3621 - 01</sub> Gly tRNA
963862 963935 + 74 23097455 OB3622 - 19</sub> Cys tRNA
963940 964021 + 82 23097455 OB3623 - 15</sub> Leu tRNA
1131160 1131233 + 74 23097455 OB3562 - 01</sub> Gly tRNA
1283782 1283854 + 73 23097455 OB3563 - 13</sub> Val tRNA
1959372 1959444 - 73 23097455 OB3564 - 17</sub> Phe tRNA
1959597 1959689 - 93 23097455 OB3624 - 08</sub> Ser tRNA
1959703 1959779 - 77 23097455 OB3625 - 16</sub> Met tRNA
1959806 1959881 - 76 23097455 OB3626 - 09</sub> His tRNA
1959895 1959971 - 77 23097455 OB3627 - 16</sub> Met tRNA
1959973 1960047 - 75 23097455 OB3628 - 07</sub> Asn tRNA
2138920 2138993 - 74 23097455 OB2103.1 - 11</sub> Arg tRNA
2138999 2139072 - 74 23097455 OB2103.2 - 01</sub> Gly tRNA
2350002 2350117 - 116 23097455 OB3565 - 5S ribosomal RNA
2350390 2353311 - 2922 23097455 OB3629 - 23S ribosomal RNA
2353644 2355210 - 1567 23097455 OB3630 - 16S ribosomal RNA
2513103 2513181 - 79 23097455 OB3566 - 11</sub> Arg tRNA