ФЭНДОМ


   LOCUS       NC_004603            3288558 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete
               sequence.
   ACCESSION   NC_004603
   VERSION     NC_004603.1  GI:28896774
   KEYWORDS    .
   SOURCE      Vibrio parahaemolyticus RIMD 2210633
     ORGANISM  Vibrio parahaemolyticus RIMD 2210633
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Vibrio.
   REFERENCE   1
     AUTHORS   Makino,K., Oshima,K., Kurokawa,K., Yokoyama,K., Uda,T.,
               Tagomori,K., Iijima,Y., Najima,M., Nakano,M., Yamashita,A.,
               Kubota,Y., Kimura,S., Yasunaga,T., Honda,T., Shinagawa,H.,
               Hattori,M. and Iida,T.
     TITLE     Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
               distinct from that of V cholerae
     JOURNAL   Lancet 361 (9359), 743-749 (2003)
      PUBMED   12620739
   REFERENCE   2
     AUTHORS   Nasu,H., Iida,T., Sugahara,T., Yamaichi,Y., Park,K.S., Yokoyama,K.,
               Makino,K., Shinagawa,H. and Honda,T.
     TITLE     A filamentous phage associated with recent pandemic Vibrio
               parahaemolyticus O3:K6 strains
     JOURNAL   J. Clin. Microbiol. 38 (6), 2156-2161 (2000)
      PUBMED   10834969
   REFERENCE   3  (bases 1 to 3288558)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-MAR-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3288558)
     AUTHORS   Oshima,K., Kurokawa,K., Makino,K., Yokoyama,K., Yasunaga,T.,
               Honda,T., Shinagawa,H., Hattori,M. and Iida,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (09-APR-2002) Ken Kurokawa, Osaka University, Genome
               Information Research Center; 3-1, Yamadaoka, Suita, Osaka 565-0871,
               Japan (E-mail:ken@gen-info.osaka-u.ac.jp,
               URL:http://www.gen-info.osaka-u.ac.jp/, Tel:81-6-6879-8365,
               Fax:81-6-6879-2047)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000031.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
33633 35103 + 1471 28896774 VPr001 - 16S ribosomal RNA
35273 35348 + 76 28896774 VPt001 - 04</sub> Glu tRNA
35351 35426 + 76 28896774 VPt002 - 10</sub> Lys tRNA
35457 35532 + 76 28896774 VPt003 - 13</sub> Val tRNA
35852 38742 + 2891 28896774 VPr002 - 23S ribosomal RNA
38832 38951 + 120 28896774 VPr003 - 5S ribosomal RNA
50014 50090 + 77 28896774 VPt004 - 11</sub> Arg tRNA
50123 50198 + 76 28896774 VPt005 - 09</sub> His tRNA
50271 50347 + 77 28896774 VPt006 - 03</sub> Pro tRNA
50397 50472 + 76 28896774 VPt007 - 09</sub> His tRNA
50497 50573 + 77 28896774 VPt008 - 03</sub> Pro tRNA
403769 403844 - 76 28896774 VPt009 - 16</sub> Met tRNA
581626 583096 + 1471 28896774 VPr004 - 16S ribosomal RNA
583274 583349 + 76 28896774 VPt010 - 02</sub> Ala tRNA
583362 583437 + 76 28896774 VPt011 - 04</sub> Glu tRNA
583703 586593 + 2891 28896774 VPr005 - 23S ribosomal RNA
586683 586802 + 120 28896774 VPr006 - 5S ribosomal RNA
586831 586907 + 77 28896774 VPt012 - 06</sub> Asp tRNA
586943 587019 + 77 28896774 VPt013 - 20</sub> Trp tRNA
771968 772052 - 85 28896774 VPt014 - 15</sub> Leu tRNA
772106 772180 - 75 28896774 VPt015 - 05</sub> Gln tRNA
772228 772312 - 85 28896774 VPt016 - 15</sub> Leu tRNA
772342 772426 - 85 28896774 VPt017 - 15</sub> Leu tRNA
772474 772550 - 77 28896774 VPt018 - 16</sub> Met tRNA
772575 772659 - 85 28896774 VPt019 - 15</sub> Leu tRNA
772712 772786 - 75 28896774 VPt020 - 05</sub> Gln tRNA
772816 772900 - 85 28896774 VPt021 - 15</sub> Leu tRNA
772954 773030 - 77 28896774 VPt022 - 16</sub> Met tRNA
773055 773139 - 85 28896774 VPt023 - 15</sub> Leu tRNA
773192 773266 - 75 28896774 VPt024 - 05</sub> Gln tRNA
773296 773380 - 85 28896774 VPt025 - 15</sub> Leu tRNA
773435 773509 - 75 28896774 VPt026 - 05</sub> Gln tRNA
773539 773623 - 85 28896774 VPt027 - 15</sub> Leu tRNA
773659 773733 - 75 28896774 VPt028 - 05</sub> Gln tRNA
773782 773866 - 85 28896774 VPt029 - 15</sub> Leu tRNA
773897 773981 - 85 28896774 VPt030 - 15</sub> Leu tRNA
774059 774135 - 77 28896774 VPt031 - 16</sub> Met tRNA
774213 774287 - 75 28896774 VPt032 - 05</sub> Gln tRNA
774442 774518 - 77 28896774 VPt033 - 16</sub> Met tRNA
789515 789591 + 77 28896774 VPt034 - 03</sub> Pro tRNA
804917 804993 - 77 28896774 VPt035 - 11</sub> Arg tRNA
912549 912625 + 77 28896774 VPt036 - 11</sub> Arg tRNA
978106 978190 - 85 28896774 VPt037 - 18</sub> Tyr tRNA
978272 978356 - 85 28896774 VPt038 - 18</sub> Tyr tRNA
978438 978522 - 85 28896774 VPt039 - 18</sub> Tyr tRNA
978604 978688 - 85 28896774 VPt040 - 18</sub> Tyr tRNA
978770 978854 - 85 28896774 VPt041 - 18</sub> Tyr tRNA
978936 979020 - 85 28896774 VPt042 - 18</sub> Tyr tRNA
1121082 1121169 + 88 28896774 VPt043 - 08</sub> Ser tRNA
1437460 1437536 + 77 28896774 VPt044 - 13</sub> Val tRNA
1437569 1437645 + 77 28896774 VPt045 - 13</sub> Val tRNA
2034204 2034279 - 76 28896774 VPt046 - 01</sub> Gly tRNA
2034290 2034376 - 87 28896774 VPt047 - 15</sub> Leu tRNA
2034453 2034528 - 76 28896774 VPt048 - 01</sub> Gly tRNA
2034566 2034639 - 74 28896774 VPt049 - 19</sub> Cys tRNA
2210208 2210283 + 76 28896774 VPt050 - 07</sub> Asn tRNA
2239837 2239927 + 91 28896774 VPt051 - 08</sub> Ser tRNA
2582455 2582531 - 77 28896774 VPt052 - 16</sub> Met tRNA
2582588 2582671 - 84 28896774 VPt053 - 15</sub> Leu tRNA
2686780 2686856 - 77 28896774 VPt054 - 11</sub> Arg tRNA
2686914 2686990 - 77 28896774 VPt055 - 11</sub> Arg tRNA
2687048 2687124 - 77 28896774 VPt056 - 11</sub> Arg tRNA
2687182 2687258 - 77 28896774 VPt057 - 11</sub> Arg tRNA
2687316 2687392 - 77 28896774 VPt058 - 11</sub> Arg tRNA
2687450 2687526 - 77 28896774 VPt059 - 11</sub> Arg tRNA
2687583 2687659 - 77 28896774 VPt060 - 11</sub> Arg tRNA
2687870 2687946 - 77 28896774 VPt061 - 11</sub> Arg tRNA
2687978 2688069 - 92 28896774 VPt062 - 08</sub> Ser tRNA
2770086 2770161 + 76 28896774 VPt063 - 17</sub> Phe tRNA
2770227 2770302 + 76 28896774 VPt064 - 12</sub> Thr tRNA
2770310 2770385 + 76 28896774 VPt065 - 17</sub> Phe tRNA
2770456 2770531 + 76 28896774 VPt066 - 07</sub> Asn tRNA
2770603 2770678 + 76 28896774 VPt067 - 12</sub> Thr tRNA
2770686 2770761 + 76 28896774 VPt068 - 17</sub> Phe tRNA
2770805 2770880 + 76 28896774 VPt069 - 07</sub> Asn tRNA
2773013 2773088 + 76 28896774 VPt070 - 17</sub> Phe tRNA
2773140 2773215 + 76 28896774 VPt071 - 12</sub> Thr tRNA
2773237 2773312 + 76 28896774 VPt072 - 07</sub> Asn tRNA
2773352 2773427 + 76 28896774 VPt073 - 12</sub> Thr tRNA
2773443 2773518 + 76 28896774 VPt074 - 07</sub> Asn tRNA
2775658 2775734 - 77 28896774 VPt075 - 06</sub> Asp tRNA
2775764 2775884 - 121 28896774 VPr007 - 5S ribosomal RNA
2775940 2776015 - 76 28896774 VPt076 - 12</sub> Thr tRNA
2776114 2776233 - 120 28896774 VPr008 - 5S ribosomal RNA
2776323 2779213 - 2891 28896774 VPr009 - 23S ribosomal RNA
2779478 2779553 - 76 28896774 VPt077 - 02</sub> Ala tRNA
2779595 2779671 - 77 28896774 VPt078 - 14</sub> Ile tRNA
2779817 2781287 - 1471 28896774 VPr010 - 16S ribosomal RNA
2790320 2790404 - 85 28896774 VPt079 - 15</sub> Leu tRNA
2881915 2881991 - 77 28896774 VPt080 - 06</sub> Asp tRNA
2882020 2882139 - 120 28896774 VPr011 - 5S ribosomal RNA
2882229 2885119 - 2891 28896774 VPr012 - 23S ribosomal RNA
2885385 2885460 - 76 28896774 VPt081 - 04</sub> Glu tRNA
2885630 2887100 - 1471 28896774 VPr013 - 16S ribosomal RNA
2988610 2988686 - 77 28896774 VPt082 - 16</sub> Met tRNA
2988743 2988818 - 76 28896774 VPt083 - 01</sub> Gly tRNA
2988837 2988913 - 77 28896774 VPt084 - 16</sub> Met tRNA
2988949 2989024 - 76 28896774 VPt085 - 01</sub> Gly tRNA
2989075 2989150 - 76 28896774 VPt086 - 01</sub> Gly tRNA
2989200 2989275 - 76 28896774 VPt087 - 01</sub> Gly tRNA
2989325 2989400 - 76 28896774 VPt088 - 01</sub> Gly tRNA
2989431 2989507 - 77 28896774 VPt089 - 16</sub> Met tRNA
2989563 2989638 - 76 28896774 VPt090 - 01</sub> Gly tRNA
2989669 2989745 - 77 28896774 VPt091 - 16</sub> Met tRNA
2989785 2989860 - 76 28896774 VPt092 - 01</sub> Gly tRNA
2989880 2989956 - 77 28896774 VPt093 - 16</sub> Met tRNA
2989992 2990067 - 76 28896774 VPt094 - 01</sub> Gly tRNA
3062167 3062243 - 77 28896774 VPt095 - 20</sub> Trp tRNA
3062312 3062388 - 77 28896774 VPt096 - 06</sub> Asp tRNA
3062417 3062536 - 120 28896774 VPr014 - 5S ribosomal RNA
3062626 3065516 - 2891 28896774 VPr015 - 23S ribosomal RNA
3065781 3065856 - 76 28896774 VPt097 - 13</sub> Val tRNA
3065871 3065946 - 76 28896774 VPt098 - 02</sub> Ala tRNA
3065979 3066054 - 76 28896774 VPt099 - 10</sub> Lys tRNA
3066057 3066132 - 76 28896774 VPt100 - 04</sub> Glu tRNA
3066302 3067772 - 1471 28896774 VPr016 - 16S ribosomal RNA
3068091 3068210 - 120 28896774 VPr017 - 5S ribosomal RNA
3068300 3071190 - 2891 28896774 VPr018 - 23S ribosomal RNA
3071548 3073018 - 1471 28896774 VPr019 - 16S ribosomal RNA
3122180 3122255 - 76 28896774 VPt101 - 12</sub> Thr tRNA
3122269 3122343 - 75 28896774 VPt102 - 01</sub> Gly tRNA
3122379 3122463 - 85 28896774 VPt103 - 18</sub> Tyr tRNA
3122500 3122575 - 76 28896774 VPt104 - 12</sub> Thr tRNA
3128159 3128235 - 77 28896774 VPt105 - 06</sub> Asp tRNA
3128264 3128383 - 120 28896774 VPr020 - 5S ribosomal RNA
3128473 3131363 - 2891 28896774 VPr021 - 23S ribosomal RNA
3131721 3133191 - 1471 28896774 VPr022 - 16S ribosomal RNA
3133510 3133629 - 120 28896774 VPr023 - 5S ribosomal RNA
3133719 3136609 - 2891 28896774 VPr024 - 23S ribosomal RNA
3136967 3138437 - 1471 28896774 VPr025 - 16S ribosomal RNA
3193080 3193170 - 91 28896774 VPt106 - 08</sub> Ser tRNA
3193238 3193357 - 120 28896774 VPr026 - 5S ribosomal RNA
3193447 3196340 - 2894 28896774 VPr027 - 23S ribosomal RNA
3196605 3196680 - 76 28896774 VPt107 - 02</sub> Ala tRNA
3196722 3196798 - 77 28896774 VPt108 - 14</sub> Ile tRNA
3196944 3198414 - 1471 28896774 VPr028 - 16S ribosomal RNA
3234328 3234404 - 77 28896774 VPt109 - 06</sub> Asp tRNA
3234433 3234552 - 120 28896774 VPr029 - 5S ribosomal RNA
3234642 3237532 - 2891 28896774 VPr030 - 23S ribosomal RNA
3237852 3237927 - 76 28896774 VPt110 - 13</sub> Val tRNA
3237958 3238033 - 76 28896774 VPt111 - 10</sub> Lys tRNA
3238036 3238111 - 76 28896774 VPt112 - 04</sub> Glu tRNA
3238281 3239751 - 1471 28896774 VPr031 - 16S ribosomal RNA