ФЭНДОМ


   LOCUS       NC_006087            2584158 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
   ACCESSION   NC_006087
   VERSION     NC_006087.1  GI:50953925
   KEYWORDS    .
   SOURCE      Leifsonia xyli subsp. xyli str. CTCB07
     ORGANISM  Leifsonia xyli subsp. xyli str. CTCB07
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Micrococcineae; Microbacteriaceae; Leifsonia.
   REFERENCE   1  (bases 1 to 2584158)
     AUTHORS   Vitorello,C.B.M., Camargo,L.E.A., Sluys,M.A.V., Kitajima,J.P.,
               Truffi,D., Amaral,A.M., Harakava,R., Franco,J.C., Wood,D.,
               Oliveira,M.C., Miyaki,C., Takita,M.A., Silva,A.C.R., Furlan,L.R.,
               Carraro,D.M., Camarotte,G., Almeida,N.F., Carrer,H., Coutinho,L.L.,
               El-Dorry,H.A., Ferro,M.I.T., Gagliardi,P.R., Giglioti,E.,
               Goldman,M.H.S., Goldman,G.H., Kimura,E.T., Ferro,E.S.,
               Kuramae,E.E., Lemos,E.G.M., Lemos,M.V.F., Mauro,S.M.Z.,
               Machado,M.A., Marino,C.L., Menck,C.F., Nunes,L.R., Oliveira,R.C.,
               Pereira,G.G., Siqueira,W., Souza,A.A., Tsai,S.M., Zanca,A.S.,
               Simpson,A.J.G., Brumbley,S.M. and Setubal,J.C.
     TITLE     The genome sequence of the gram-positive sugarcane pathogen
               Leifsonia xyli subsp. xyli
     JOURNAL   Mol. Plant Microbe Interact. 17 (8), 827-836 (2004)
      PUBMED   15305603
   REFERENCE   2  (bases 1 to 2584158)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (21-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2584158)
     AUTHORS   .
     CONSRTM   NCBI Microbial Genomes Annotation Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-DEC-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016822.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
10986 11065 + 80 50953925 Lxx00090 - 14</sub> Ile tRNA
11075 11150 + 76 50953925 Lxx00100 - 02</sub> Ala tRNA
28490 28579 + 90 50953925 Lxx00280 - 15</sub> Leu tRNA
133817 135263 + 1447 50953925 Lxx01380 - 16S ribosomal RNA
135816 138903 + 3088 50953925 Lxx01390 - 23S ribosomal RNA
139040 139203 + 164 50953925 Lxx01400 - 5S ribosomal RNA
161086 161162 - 77 50953925 Lxx01610 - 16</sub> Met tRNA
161194 161271 - 78 50953925 Lxx01620 - 12</sub> Thr tRNA
183370 183457 + 88 50953925 Lxx01890 - 18</sub> Tyr tRNA
216011 216086 - 76 50953925 Lxx02160 - 11</sub> Arg tRNA
232050 232141 - 92 50953925 Lxx02320 - 08</sub> Ser tRNA
232468 232558 - 91 50953925 Lxx02330 - 08</sub> Ser tRNA
290058 290136 + 79 50953925 Lxx02880 - 20</sub> Trp tRNA
334516 334606 - 91 50953925 Lxx03390 - 08</sub> Ser tRNA
360885 360964 - 80 50953925 Lxx03580 - 03</sub> Pro tRNA
414101 414179 + 79 50953925 Lxx04110 - 12</sub> Thr tRNA
585871 585950 + 80 50953925 Lxx05760 - 03</sub> Pro tRNA
603549 603627 + 79 50953925 Lxx05940 - 02</sub> Ala tRNA
675490 675568 - 79 50953925 Lxx06790 - 11</sub> Arg tRNA
791145 791218 - 74 50953925 Lxx07810 - 01</sub> Gly tRNA
791319 791399 + 81 50953925 Lxx07820 - 03</sub> Pro tRNA
821712 821790 + 79 50953925 Lxx08140 - 02</sub> Ala tRNA
828968 829058 - 91 50953925 Lxx08210 - 15</sub> Leu tRNA
870541 870619 + 79 50953925 Lxx08590 - 07</sub> Asn tRNA
874676 874755 + 80 50953925 Lxx08640 - 16</sub> Met tRNA
956662 956741 - 80 50953925 Lxx09310 - 16</sub> Met tRNA
980250 980328 + 79 50953925 Lxx09570 - 04</sub> Glu tRNA
1018072 1018262 - 191 50953925 Lxx09955 - putative ribonuclease P RNA
1089308 1089386 - 79 50953925 Lxx10620 - 13</sub> Val tRNA
1089574 1089652 + 79 50953925 Lxx10630 - 01</sub> Gly tRNA
1089717 1089790 + 74 50953925 Lxx10640 - 19</sub> Cys tRNA
1089810 1089884 + 75 50953925 Lxx10650 - 13</sub> Val tRNA
1168466 1168555 - 90 50953925 Lxx11380 - 15</sub> Leu tRNA
1320715 1320793 + 79 50953925 Lxx12680 - 13</sub> Val tRNA
1344095 1344173 - 79 50953925 Lxx12900 - 11</sub> Arg tRNA
1359697 1359771 - 75 50953925 Lxx13060 - 05</sub> Gln tRNA
1390092 1390170 - 79 50953925 Lxx13390 - 10</sub> Lys tRNA
1400585 1400978 - 394 50953925 Lxx13468 - tmRNA
1406516 1406598 + 83 50953925 Lxx13530 - 15</sub> Leu tRNA
1462639 1462717 - 79 50953925 Lxx14140 - 09</sub> His tRNA
1767375 1767454 + 80 50953925 Lxx17020 - 15</sub> Leu tRNA
1810888 1810965 - 78 50953925 Lxx17440 - 05</sub> Gln tRNA
1851490 1851567 - 78 50953925 Lxx17850 - 11</sub> Arg tRNA
1879265 1879343 - 79 50953925 Lxx18170 - 12</sub> Thr tRNA
1910035 1910113 + 79 50953925 Lxx18500 - 10</sub> Lys tRNA
2189596 2189688 - 93 50953925 Lxx21270 - 08</sub> Ser tRNA
2217597 2217672 + 76 50953925 Lxx21560 - 04</sub> Glu tRNA
2217721 2217800 + 80 50953925 Lxx21570 - 06</sub> Asp tRNA
2217856 2217934 + 79 50953925 Lxx21580 - 17</sub> Phe tRNA
2447451 2447527 + 77 50953925 Lxx23840 - 01</sub> Gly tRNA