ФЭНДОМ


   LOCUS       NC_006347            5277274 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Bacteroides fragilis YCH46, complete genome.
   ACCESSION   NC_006347
   VERSION     NC_006347.1  GI:53711291
   KEYWORDS    .
   SOURCE      Bacteroides fragilis YCH46
     ORGANISM  Bacteroides fragilis YCH46
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Bacteroidaceae; Bacteroides.
   REFERENCE   1  (bases 1 to 5277274)
     AUTHORS   Kuwahara,T., Yamashita,A., Hirakawa,H., Nakayama,H., Toh,H.,
               Okada,N., Kuhara,S., Hattori,M., Hayashi,T. and Ohnishi,Y.
     TITLE     Genomic analysis of Bacteroides fragilis reveals extensive DNA
               inversions regulating cell surface adaptation
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (41), 14919-14924 (2004)
      PUBMED   15466707
   REFERENCE   2  (bases 1 to 5277274)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (01-OCT-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5277274)
     AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (20-APR-2004) Kitasato Institute for Life Sciences,
               1-15-1, Kitasato, Sagamihara, Kanagawa 228-8555, Japan
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP006841.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
74043 74113 + 71 53711291 BFtRNA01 - 05</sub> Gln tRNA
331622 331696 - 75 53711291 BFtRNA02 - 04</sub> Glu tRNA
473414 473498 - 85 53711291 BFtRNA03 - 15</sub> Leu tRNA
589029 589101 + 73 53711291 BFtRNA04 - 01</sub> Gly tRNA
589116 589199 + 84 53711291 BFtRNA05 - 15</sub> Leu tRNA
614061 614133 - 73 53711291 BFtRNA06 - 03</sub> Pro tRNA
614146 614218 - 73 53711291 BFtRNA07 - 17</sub> Phe tRNA
695538 695614 - 77 53711291 BFtRNA08 - 16</sub> Met tRNA
770190 770262 - 73 53711291 BFtRNA09 - 10</sub> Lys tRNA
879289 879366 - 78 53711291 BFtRNA10 - 03</sub> Pro tRNA
923978 924051 + 74 53711291 BFtRNA11 - 05</sub> Gln tRNA
1157377 1157452 - 76 53711291 BFtRNA12 - 01</sub> Gly tRNA
1157458 1157543 - 86 53711291 BFtRNA13 - 18</sub> Tyr tRNA
1422325 1422401 + 77 53711291 BFtRNA14 - 12</sub> Thr tRNA
1506263 1506350 + 88 53711291 BFtRNA15 - 08</sub> Ser tRNA
1584834 1584918 + 85 53711291 BFtRNA16 - 08</sub> Ser tRNA
1662518 1662589 + 72 53711291 BFtRNA17 - 19</sub> Cys tRNA
1690948 1691024 - 77 53711291 BFtRNA18 - 12</sub> Thr tRNA
1970118 1970190 - 73 53711291 BFtRNA19 - 12</sub> Thr tRNA
2136557 2136643 + 87 53711291 BFtRNA20 - 08</sub> Ser tRNA
2136722 2136796 + 75 53711291 BFtRNA21 - 04</sub> Glu tRNA
2330044 2330116 - 73 53711291 BFtRNA22 - 10</sub> Lys tRNA
2410290 2410366 + 77 53711291 BFtRNA23 - 06</sub> Asp tRNA
2609966 2610042 + 77 53711291 BFtRNA24 - 11</sub> Arg tRNA
2660087 2660162 - 76 53711291 BFtRNA25 - 10</sub> Lys tRNA
2663447 2663522 - 76 53711291 BFtRNA26 - 10</sub> Lys tRNA
2726254 2726331 - 78 53711291 BFtRNA27 - 03</sub> Pro tRNA
2726365 2726442 - 78 53711291 BFtRNA28 - 03</sub> Pro tRNA
2780183 2780259 - 77 53711291 BFtRNA29 - 11</sub> Arg tRNA
2780282 2780355 - 74 53711291 BFtRNA30 - 11</sub> Arg tRNA
2780374 2780447 - 74 53711291 BFtRNA31 - 11</sub> Arg tRNA
2858417 2858492 - 76 53711291 BFtRNA32 - 01</sub> Gly tRNA
2904202 2904274 - 73 53711291 BFtRNA33 - 01</sub> Gly tRNA
2904279 2904363 - 85 53711291 BFtRNA34 - 15</sub> Leu tRNA
2904426 2904501 - 76 53711291 BFtRNA35 - 01</sub> Gly tRNA
2904524 2904607 - 84 53711291 BFtRNA36 - 15</sub> Leu tRNA
2904642 2904726 - 85 53711291 BFtRNA37 - 15</sub> Leu tRNA
2904752 2904824 - 73 53711291 BFtRNA38 - 01</sub> Gly tRNA
3140678 3140786 - 109 53711291 BF5SrRNA01 - 5S ribosomal RNA
3140885 3143762 - 2878 53711291 BF23SrRNA01 - 23S ribosomal RNA
3143917 3143990 - 74 53711291 BFtRNA39 - 02</sub> Ala tRNA
3144019 3144095 - 77 53711291 BFtRNA40 - 14</sub> Ile tRNA
3144323 3145859 - 1537 53711291 BF16SrRNA01 - 16S ribosomal RNA
3453440 3453513 + 74 53711291 BFtRNA41 - 06</sub> Asp tRNA
3453544 3453620 + 77 53711291 BFtRNA42 - 06</sub> Asp tRNA
3655080 3655155 + 76 53711291 BFtRNA43 - 09</sub> His tRNA
3713658 3713731 + 74 53711291 BFtRNA44 - 02</sub> Ala tRNA
3944277 3944385 - 109 53711291 BF5SrRNA02 - 5S ribosomal RNA
3944484 3947362 - 2879 53711291 BF23SrRNA02 - 23S ribosomal RNA
3947513 3947586 - 74 53711291 BFtRNA45 - 02</sub> Ala tRNA
3947615 3947691 - 77 53711291 BFtRNA46 - 14</sub> Ile tRNA
3947850 3949386 - 1537 53711291 BF16SrRNA02 - 16S ribosomal RNA
3956374 3956446 + 73 53711291 BFtRNA47 - 17</sub> Phe tRNA
3972876 3972949 + 74 53711291 BFtRNA48 -
4095270 4095342 + 73 53711291 BFtRNA49 - 20</sub> Trp tRNA
4249141 4249228 - 88 53711291 BFtRNA50 - 08</sub> Ser tRNA
4350360 4350434 - 75 53711291 BFtRNA51 - 11</sub> Arg tRNA
4523401 4523509 - 109 53711291 BF5SrRNA03 - 5S ribosomal RNA
4523608 4526486 - 2879 53711291 BF23SrRNA03 - 23S ribosomal RNA
4526637 4526710 - 74 53711291 BFtRNA52 - 02</sub> Ala tRNA
4526739 4526815 - 77 53711291 BFtRNA53 - 14</sub> Ile tRNA
4527043 4528579 - 1537 53711291 BF16SrRNA03 - 16S ribosomal RNA
4590511 4590585 - 75 53711291 BFtRNA54 - 13</sub> Val tRNA
4590637 4590711 - 75 53711291 BFtRNA55 - 13</sub> Val tRNA
4590738 4590815 - 78 53711291 BFtRNA56 - 13</sub> Val tRNA
4672821 4672929 - 109 53711291 BF5SrRNA04 - 5S ribosomal RNA
4673028 4675905 - 2878 53711291 BF23SrRNA04 - 23S ribosomal RNA
4676056 4676129 - 74 53711291 BFtRNA57 - 02</sub> Ala tRNA
4676158 4676234 - 77 53711291 BFtRNA58 - 14</sub> Ile tRNA
4676388 4677924 - 1537 53711291 BF16SrRNA04 - 16S ribosomal RNA
4717266 4717341 + 76 53711291 BFtRNA59 - 16</sub> Met tRNA
4732179 4732287 - 109 53711291 BF5SrRNA05 - 5S ribosomal RNA
4732386 4735263 - 2878 53711291 BF23SrRNA05 - 23S ribosomal RNA
4735413 4735486 - 74 53711291 BFtRNA60 - 02</sub> Ala tRNA
4735515 4735591 - 77 53711291 BFtRNA61 - 14</sub> Ile tRNA
4735744 4737280 - 1537 53711291 BF16SrRNA05 - 16S ribosomal RNA
4793735 4793810 - 76 53711291 BFtRNA62 - 20</sub> Trp tRNA
4795099 4795170 - 72 53711291 BFtRNA63 - 12</sub> Thr tRNA
4795181 4795253 - 73 53711291 BFtRNA64 - 01</sub> Gly tRNA
4795282 4795367 - 86 53711291 BFtRNA65 - 18</sub> Tyr tRNA
4795439 4795515 - 77 53711291 BFtRNA66 - 12</sub> Thr tRNA
4810635 4810722 + 88 53711291 BFtRNA67 -
4919402 4919485 - 84 53711291 BFtRNA68 - 15</sub> Leu tRNA
4989982 4990055 + 74 53711291 BFtRNA69 - 07</sub> Asn tRNA
4990085 4990161 + 77 53711291 BFtRNA70 - 07</sub> Asn tRNA
5081003 5081077 - 75 53711291 BFtRNA71 - 11</sub> Arg tRNA
5184390 5184463 + 74 53711291 BFtRNA72 - 16</sub> Met tRNA
5191939 5192047 - 109 53711291 BF5SrRNA06 - 5S ribosomal RNA
5192146 5195023 - 2878 53711291 BF23SrRNA06 - 23S ribosomal RNA
5195173 5195246 - 74 53711291 BFtRNA73 - 02</sub> Ala tRNA
5195275 5195351 - 77 53711291 BFtRNA74 - 14</sub> Ile tRNA
5195504 5197040 - 1537 53711291 BF16SrRNA06 - 16S ribosomal RNA