ФЭНДОМ


   LOCUS       NC_006370            4085304 bp    DNA     circular BCT 16-AUG-2007
   DEFINITION  Photobacterium profundum SS9 chromosome 1, complete sequence.
   ACCESSION   NC_006370
   VERSION     NC_006370.1  GI:54307237
   KEYWORDS    complete genome.
   SOURCE      Photobacterium profundum SS9
     ORGANISM  Photobacterium profundum SS9
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Photobacterium.
   REFERENCE   1  (bases 1 to 4085304)
     AUTHORS   Vezzi,A., Campanaro,S., D'Angelo,M., Simonato,F., Vitulo,N.,
               Lauro,F.M., Cestaro,A., Malacrida,G., Simionati,B., Cannata,N.,
               Romualdi,C., Bartlett,D.H. and Valle,G.
     TITLE     Life at depth: Photobacterium profundum genome sequence and
               expression analysis
     JOURNAL   Science 307 (5714), 1459-1461 (2005)
      PUBMED   15746425
   REFERENCE   2  (bases 1 to 4085304)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (20-OCT-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3
     AUTHORS   Cestaro,A.
     TITLE     Direct Submission
     JOURNAL   Submitted (22-MAR-2004) Cestaro A., CRIBI, Biotechnology Centre,
               University of Padova via U. Bassi 58/B, 35131 Padova, Italy
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CR354531.
               coding regions predicted by orpheus and glimmer; tRNA features
               predicted by tRNAscan SE program.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
69574 71120 + 1547 54307237 PBPRA0068 - 16S ribosomal RNA
71493 74418 + 2926 54307237 PBPRA0069 - 23S ribosomal RNA
74716 74833 + 118 54307237 PBPRA0070 - 5S ribosomal RNA
75252 76814 + 1563 54307237 PBPRA0071 - 16S ribosomal RNA
76907 76982 + 76 54307237 PBPRA0072 - 04</sub> Glu tRNA
77016 77091 + 76 54307237 PBPRA0073 - 10</sub> Lys tRNA
77159 77234 + 76 54307237 PBPRA0074 - 13</sub> Val tRNA
77601 80495 + 2895 54307237 PBPRA0075 - 23S ribosomal RNA
80793 80910 + 118 54307237 PBPRA0076 - 5S ribosomal RNA
81008 81084 + 77 54307237 PBPRA0077 - 06</sub> Asp tRNA
96967 97043 + 77 54307237 PBPRA0093 - 11</sub> Arg tRNA
97078 97153 + 76 54307237 PBPRA0094 - 09</sub> His tRNA
97220 97296 + 77 54307237 PBPRA0095 - 03</sub> Pro tRNA
97306 97381 + 76 54307237 PBPRA0096 - 09</sub> His tRNA
97433 97509 + 77 54307237 PBPRA0097 - 03</sub> Pro tRNA
103843 103919 + 77 54307237 PBPRA0102 - 20</sub> Trp tRNA
361216 362748 + 1533 54307237 PBPRA0359 - 16S ribosomal RNA
362841 362916 + 76 54307237 PBPRA0360 - 04</sub> Glu tRNA
362950 363025 + 76 54307237 PBPRA0361 - 10</sub> Lys tRNA
363092 363167 + 76 54307237 PBPRA0362 - 13</sub> Val tRNA
363497 366391 + 2895 54307237 PBPRA0363 - 23S ribosomal RNA
366542 366659 + 118 54307237 PBPRA0364 - 5S ribosomal RNA
366702 366777 + 76 54307237 PBPRA0365 - 12</sub> Thr tRNA
366782 366902 + 121 54307237 PBPR_Ar01 - 5S ribosomal RNA
443616 443691 - 76 54307237 PBPRA0429 - 16</sub> Met tRNA
520018 520102 + 85 54307237 PBPRA0491 - 15</sub> Leu tRNA
529482 531044 + 1563 54307237 PBPRA0502 - 16S ribosomal RNA
531137 531212 + 76 54307237 PBPRA0503 - 04</sub> Glu tRNA
531246 531321 + 76 54307237 PBPRA0504 - 10</sub> Lys tRNA
531388 531463 + 76 54307237 PBPRA0505 - 13</sub> Val tRNA
531807 534700 + 2894 54307237 PBPRA0506 - 23S ribosomal RNA
534902 535019 + 118 54307237 PBPRA0507 - 5S ribosomal RNA
535051 535127 + 77 54307237 PBPRA0508 - 06</sub> Asp tRNA
665339 665423 + 85 54307237 PBPRA0608 - 15</sub> Leu tRNA
665482 665558 + 77 54307237 PBPRA0609 - 16</sub> Met tRNA
779541 781117 + 1577 54307237 PBPRA0704 - 16S ribosomal RNA
781215 781290 + 76 54307237 PBPRA0705 - 04</sub> Glu tRNA
781319 781394 + 76 54307237 PBPRA0706 - 10</sub> Lys tRNA
781461 781536 + 76 54307237 PBPRA0707 - 13</sub> Val tRNA
781628 781703 + 76 54307237 PBPRA0708 - 02</sub> Ala tRNA
782045 784970 + 2926 54307237 PBPRA0709 - 23S ribosomal RNA
785220 785337 + 118 54307237 PBPRA0710 - 5S ribosomal RNA
785386 785505 + 120 54307237 PBPR_Ar02 - 5S ribosomal RNA
785537 785613 + 77 54307237 PBPRA0711 - 06</sub> Asp tRNA
966735 966810 + 76 54307237 PBPRA0875 - 02</sub> Ala tRNA
991092 991168 - 77 54307237 PBPRA0892 - 11</sub> Arg tRNA
1922427 1922502 - 76 54307237 PBPRA1673 - 07</sub> Asn tRNA
1922509 1922583 - 75 54307237 PBPRA1674 - 01</sub> Gly tRNA
1922592 1922667 - 76 54307237 PBPRA1675 - 12</sub> Thr tRNA
1922713 1922803 - 91 54307237 PBPRA1676 - 08</sub> Ser tRNA
2064941 2065020 + 80 54307237 PBPRA1795 - 10</sub> Lys tRNA
2413898 2413974 + 77 54307237 PBPRA2092 - 13</sub> Val tRNA
2414020 2414096 + 77 54307237 PBPRA2093 - 13</sub> Val tRNA
2414142 2414218 + 77 54307237 PBPRA2094 - 13</sub> Val tRNA
2414263 2414339 + 77 54307237 PBPRA2095 - 13</sub> Val tRNA
2513558 2513648 - 91 54307237 PBPRA2183 - 08</sub> Ser tRNA
2555097 2555170 - 74 54307237 PBPRA2218 - 19</sub> Cys tRNA
2555229 2555315 - 87 54307237 PBPRA2219 - 15</sub> Leu tRNA
2557486 2557573 - 88 54307237 PBPRA2221 - 15</sub> Leu tRNA
2563807 2563882 - 76 54307237 PBPRA2225 - 01</sub> Gly tRNA
2563926 2564012 - 87 54307237 PBPRA2226 - 15</sub> Leu tRNA
2564120 2564193 - 74 54307237 PBPRA2227 - 19</sub> Cys tRNA
2572575 2572650 - 76 54307237 PBPRA2232 - 01</sub> Gly tRNA
2572683 2572769 - 87 54307237 PBPRA2233 - 15</sub> Leu tRNA
2572877 2572952 - 76 54307237 PBPRA2234 - 01</sub> Gly tRNA
2572974 2573047 - 74 54307237 PBPRA2235 - 19</sub> Cys tRNA
2654740 2654830 - 91 54307237 PBPRA2305 - 08</sub> Ser tRNA
2931838 2931928 - 91 54307237 PBPRA2529 - 08</sub> Ser tRNA
2931953 2932040 - 88 54307237 PBPRA2530 - 08</sub> Ser tRNA
2953105 2953192 - 88 54307237 PBPRA2544 - 08</sub> Ser tRNA
3057691 3057767 - 77 54307237 PBPRA2640 - 11</sub> Arg tRNA
3161180 3161264 + 85 54307237 PBPRA2723 - 18</sub> Tyr tRNA
3161363 3161447 + 85 54307237 PBPRA2724 - 18</sub> Tyr tRNA
3161548 3161633 + 86 54307237 PBPRA2725 - 18</sub> Tyr tRNA
3161734 3161818 + 85 54307237 PBPRA2726 - 18</sub> Tyr tRNA
3161948 3162032 + 85 54307237 PBPRA2727 - 18</sub> Tyr tRNA
3162133 3162217 + 85 54307237 PBPRA2728 - 18</sub> Tyr tRNA
3276351 3276427 - 77 54307237 PBPRA2826 - 03</sub> Pro tRNA
3277141 3277217 - 77 54307237 PBPRA2827 - 03</sub> Pro tRNA
3277606 3277682 - 77 54307237 PBPRA2828 - 03</sub> Pro tRNA
3278062 3278138 - 77 54307237 PBPRA2829 - 03</sub> Pro tRNA
3278363 3278449 - 87 54307237 PBPRA2830 - Xaa tRNA
3302046 3302122 + 77 54307237 PBPRA2852 - 16</sub> Met tRNA
3302171 3302255 + 85 54307237 PBPRA2853 - 15</sub> Leu tRNA
3302308 3302382 + 75 54307237 PBPRA2854 - 05</sub> Gln tRNA
3302449 3302525 + 77 54307237 PBPRA2855 - 16</sub> Met tRNA
3302574 3302658 + 85 54307237 PBPRA2856 - 15</sub> Leu tRNA
3302688 3302762 + 75 54307237 PBPRA2857 - 05</sub> Gln tRNA
3302829 3302905 + 77 54307237 PBPRA2858 - 16</sub> Met tRNA
3302954 3303038 + 85 54307237 PBPRA2859 - 15</sub> Leu tRNA
3303068 3303142 + 75 54307237 PBPRA2860 - 05</sub> Gln tRNA
3303207 3303283 + 77 54307237 PBPRA2861 - 16</sub> Met tRNA
3303329 3303413 + 85 54307237 PBPRA2862 - 15</sub> Leu tRNA
3303531 3303615 + 85 54307237 PBPRA2863 - 15</sub> Leu tRNA
3303674 3303748 + 75 54307237 PBPRA2864 - 05</sub> Gln tRNA
3303832 3303916 + 85 54307237 PBPRA2865 - 15</sub> Leu tRNA
3304046 3304130 + 85 54307237 PBPRA2866 - 15</sub> Leu tRNA
3304189 3304263 + 75 54307237 PBPRA2867 - 05</sub> Gln tRNA
3304347 3304431 + 85 54307237 PBPRA2868 - 15</sub> Leu tRNA
3304562 3304646 + 85 54307237 PBPRA2869 - 15</sub> Leu tRNA
3304705 3304779 + 75 54307237 PBPRA2870 - 05</sub> Gln tRNA
3304844 3304920 + 77 54307237 PBPRA2871 - 16</sub> Met tRNA
3304966 3305050 + 85 54307237 PBPRA2872 - 15</sub> Leu tRNA
3305168 3305252 + 85 54307237 PBPRA2873 - 15</sub> Leu tRNA
3305311 3305385 + 75 54307237 PBPRA2874 - 05</sub> Gln tRNA
3305469 3305553 + 85 54307237 PBPRA2875 - 15</sub> Leu tRNA
3356938 3357014 - 77 54307237 PBPRA2925 - 20</sub> Trp tRNA
3357051 3357127 - 77 54307237 PBPRA2926 - 06</sub> Asp tRNA
3357225 3357342 - 118 54307237 PBPRA2927 - 5S ribosomal RNA
3357537 3360445 - 2909 54307237 PBPRA2928 - 23S ribosomal RNA
3360757 3360832 - 76 54307237 PBPRA2929 - 02</sub> Ala tRNA
3360882 3360957 - 76 54307237 PBPRA2930 - 13</sub> Val tRNA
3361024 3361099 - 76 54307237 PBPRA2931 - 10</sub> Lys tRNA
3361132 3361207 - 76 54307237 PBPRA2932 - 04</sub> Glu tRNA
3361302 3362848 - 1547 54307237 PBPRA2933 - 16S ribosomal RNA
3453084 3453160 - 77 54307237 PBPRA3012 - 06</sub> Asp tRNA
3453193 3453313 - 121 54307237 PBPR_Ar03 - 5S ribosomal RNA
3453362 3453479 - 118 54307237 PBPRA3013 - 5S ribosomal RNA
3453780 3456673 - 2894 54307237 PBPRA3014 - 23S ribosomal RNA
3457017 3457092 - 76 54307237 PBPRA3015 - 02</sub> Ala tRNA
3457137 3457213 - 77 54307237 PBPRA3016 - 14</sub> Ile tRNA
3457370 3458934 - 1565 54307237 PBPRA3017 - 16S ribosomal RNA
3498958 3499034 - 77 54307237 PBPRA3053 - 11</sub> Arg tRNA
3499092 3499168 - 77 54307237 PBPRA3054 - 11</sub> Arg tRNA
3499226 3499302 - 77 54307237 PBPRA3055 - 11</sub> Arg tRNA
3499360 3499436 - 77 54307237 PBPRA3056 - 11</sub> Arg tRNA
3499494 3499570 - 77 54307237 PBPRA3057 - 11</sub> Arg tRNA
3499628 3499704 - 77 54307237 PBPRA3058 - 11</sub> Arg tRNA
3499762 3499838 - 77 54307237 PBPRA3059 - 11</sub> Arg tRNA
3500033 3500109 - 77 54307237 PBPRA3060 - 11</sub> Arg tRNA
3500200 3500291 - 92 54307237 PBPRA3061 - 08</sub> Ser tRNA
3500304 3500380 - 77 54307237 PBPRA3062 - 11</sub> Arg tRNA
3500438 3500514 - 77 54307237 PBPRA3063 - 11</sub> Arg tRNA
3500553 3500644 - 92 54307237 PBPRA3064 - 08</sub> Ser tRNA
3590422 3590497 + 76 54307237 PBPRA3157 - 17</sub> Phe tRNA
3590557 3590632 + 76 54307237 PBPRA3158 - 07</sub> Asn tRNA
3590714 3590789 + 76 54307237 PBPRA3159 - 12</sub> Thr tRNA
3590874 3590949 + 76 54307237 PBPRA3160 - 17</sub> Phe tRNA
3590957 3591032 + 76 54307237 PBPRA3161 - 07</sub> Asn tRNA
3591113 3591188 + 76 54307237 PBPRA3162 - 12</sub> Thr tRNA
3591273 3591348 + 76 54307237 PBPRA3163 - 17</sub> Phe tRNA
3591356 3591431 + 76 54307237 PBPRA3164 - 07</sub> Asn tRNA
3591478 3591553 + 76 54307237 PBPRA3165 - 12</sub> Thr tRNA
3743227 3743303 - 77 54307237 PBPRA3300 - 06</sub> Asp tRNA
3743337 3743454 - 118 54307237 PBPRA3301 - 5S ribosomal RNA
3743656 3746563 - 2908 54307237 PBPRA3302 - 23S ribosomal RNA
3746936 3748468 - 1533 54307237 PBPRA3303 - 16S ribosomal RNA
3748887 3749004 - 118 54307237 PBPRA3304 - 5S ribosomal RNA
3749206 3752100 - 2895 54307237 PBPRA3305 - 23S ribosomal RNA
3752473 3754005 - 1533 54307237 PBPRA3306 - 16S ribosomal RNA
3808584 3808660 - 77 54307237 PBPRA3357 - 16</sub> Met tRNA
3808733 3808822 - 90 54307237 PBPRA3358 - 01</sub> Gly tRNA
3808854 3808930 - 77 54307237 PBPRA3359 - 16</sub> Met tRNA
3809002 3809077 - 76 54307237 PBPRA3360 - 01</sub> Gly tRNA
3809109 3809185 - 77 54307237 PBPRA3361 - 16</sub> Met tRNA
3809257 3809332 - 76 54307237 PBPRA3362 - 01</sub> Gly tRNA
3809364 3809440 - 77 54307237 PBPRA3363 - 16</sub> Met tRNA
3809512 3809587 - 76 54307237 PBPRA3364 - 01</sub> Gly tRNA
3809619 3809695 - 77 54307237 PBPRA3365 - 16</sub> Met tRNA
3809766 3809841 - 76 54307237 PBPRA3366 - 01</sub> Gly tRNA
3809873 3809949 - 77 54307237 PBPRA3367 - 16</sub> Met tRNA
3810020 3810095 - 76 54307237 PBPRA3368 - 01</sub> Gly tRNA
3810127 3810203 - 77 54307237 PBPRA3369 - 16</sub> Met tRNA
3893932 3894008 - 77 54307237 PBPRA3440 - 12</sub> Thr tRNA
3894021 3894095 - 75 54307237 PBPRA3441 - 01</sub> Gly tRNA
3894135 3894219 - 85 54307237 PBPRA3442 - 18</sub> Tyr tRNA
3894239 3894303 - 65 54307237 PBPRA3443 - 12</sub> Thr tRNA
3903560 3903636 - 77 54307237 PBPRA3452 - 06</sub> Asp tRNA
3903739 3903856 - 118 54307237 PBPRA3453 - 5S ribosomal RNA
3904154 3907048 - 2895 54307237 PBPRA3454 - 23S ribosomal RNA
3907355 3907430 - 76 54307237 PBPRA3455 - 02</sub> Ala tRNA
3907475 3907551 - 77 54307237 PBPRA3456 - 14</sub> Ile tRNA
3907627 3909173 - 1547 54307237 PBPRA3457 - 16S ribosomal RNA
3909582 3909699 - 118 54307237 PBPRA3458 - 5S ribosomal RNA
3909999 3912891 - 2893 54307237 PBPRA3459 - 23S ribosomal RNA
3913263 3914810 - 1548 54307237 PBPRA3460 - 16S ribosomal RNA
4020697 4020814 - 118 54307237 PBPRA3555 - 5S ribosomal RNA
4020997 4023908 - 2912 54307237 PBPRA3556 - 23S ribosomal RNA
4024247 4025793 - 1547 54307237 PBPRA3557 - 16S ribosomal RNA
4026211 4026328 - 118 54307237 PBPRA3558 - 5S ribosomal RNA
4026628 4029539 - 2912 54307237 PBPRA3559 - 23S ribosomal RNA
4029867 4029942 - 76 54307237 PBPRA3560 - 13</sub> Val tRNA
4030009 4030084 - 76 54307237 PBPRA3561 - 10</sub> Lys tRNA
4030118 4030193 - 76 54307237 PBPRA3562 - 04</sub> Glu tRNA
4030288 4031836 - 1549 54307237 PBPRA3563 - 16S ribosomal RNA
4032255 4032372 - 118 54307237 PBPRA3564 - 5S ribosomal RNA
4032553 4035464 - 2912 54307237 PBPRA3565 - 23S ribosomal RNA
4035769 4035844 - 76 54307237 PBPRA3566 - 02</sub> Ala tRNA
4035889 4035965 - 77 54307237 PBPRA3567 - 14</sub> Ile tRNA
4036041 4037588 - 1548 54307237 PBPRA3568 - 16S ribosomal RNA