ФЭНДОМ


   LOCUS       NC_006511            4585229 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, complete genome.
   ACCESSION   NC_006511
   VERSION     NC_006511.1  GI:56412276
   KEYWORDS    .
   SOURCE      Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
     ORGANISM  Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Salmonella.
   REFERENCE   1  (bases 1 to 4585229)
     AUTHORS   McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
               Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
               Harkins,C.R., Wang,C., Nguyen,C., Berghoff,A., Elliott,G.,
               Kohlberg,S., Strong,C., Du,F., Carter,J., Kremizki,C., Layman,D.,
               Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Minx,P.,
               Delehaunty,K., Fronick,C., Magrini,V., Nhan,M., Warren,W.,
               Florea,L., Spieth,J. and Wilson,R.K.
     TITLE     Comparison of genome degradation in Paratyphi A and Typhi,
               human-restricted serovars of Salmonella enterica that cause typhoid
     JOURNAL   Nat. Genet. 36 (12), 1268-1274 (2004)
      PUBMED   15531882
   REFERENCE   2  (bases 1 to 4585229)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-DEC-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4585229)
     AUTHORS   McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
               Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
               Harkins,R., Wang,C., Nguyen,C., Burghoff,A., Elliott,G.,
               Kohlberg,S., Strong,C., Ali,J., Dante,M., Du,F., Layman,D.,
               Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Delehaunty,K.,
               Fronick,C., Florea,L., Spieth,J., Nhan,M. and Wilson,R.K.
     TITLE     Direct Submission
     JOURNAL   Submitted (01-OCT-2004) Genome Sequencing Center, Washington
               University, 4444 Forest Park Ave., St. Louis, MO 63108, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000026.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
258278 258416 + 139 56412276 SPA0222 - t44; sRNA gene
293322 294867 + 1546 56412276 SPA0256 - 16S ribosomal RNA
294932 295005 + 74 56412276 SPA0257 - 14</sub> Ile tRNA
295118 295190 + 73 56412276 SPA0258 - 02</sub> Ala tRNA
295377 298280 + 2904 56412276 SPA0259 - 23S ribosomal RNA
298375 298496 + 122 56412276 SPA0261 - 5S ribosomal RNA
338818 338966 + 149 56412276 SPA0301 - tke1; sRNA gene
371264 371557 - 294 56412276 SPA0332 - ryfA; sRNA gene
511051 511123 - 73 56412276 SPA0442 - 10</sub> Lys tRNA
511131 511203 - 73 56412276 SPA0443 - 13</sub> Val tRNA
511248 511320 - 73 56412276 SPA0444 - 13</sub> Val tRNA
511369 511441 - 73 56412276 SPA0445 - 13</sub> Val tRNA
514147 514219 + 73 56412276 SPA0449 - 02</sub> Ala tRNA
542019 542090 - 72 56412276 SPA0470 - 11</sub> Arg tRNA
678264 678620 - 357 56412276 SPA0596 - micF RNA gene
700300 700366 - 67 56412276 SPA0621 -
824722 824858 - 137 56412276 SPA0740 - tp8; sRNA
949756 949828 - 73 56412276 SPA0858 - 07</sub> Asn tRNA
951587 951659 + 73 56412276 SPA0860 - 07</sub> Asn tRNA
955022 955094 - 73 56412276 SPA0865 - 07</sub> Asn tRNA
955645 955717 - 73 56412276 SPA0868 - 07</sub> Asn tRNA
956704 956790 + 87 56412276 SPA0870 - 08</sub> Ser tRNA
970205 970285 - 81 56412276 SPA0885 - dsrA RNA gene
1002560 1002632 + 73 56412276 SPA0925 - 01</sub> Gly tRNA
1002688 1002758 + 71 56412276 SPA0926 - 19</sub> Cys tRNA
1002773 1002856 + 84 56412276 SPA0927 - 15</sub> Leu tRNA
1188501 1188621 - 121 56412276 SPA1114 - rtT RNA gene
1188676 1188796 - 121 56412276 SPA1115 - rtT RNA gene
1188851 1188971 - 121 56412276 SPA1116 - rtT RNA gene
1189026 1189146 - 121 56412276 SPA1117 - rtT RNA gene
1189201 1189321 - 121 56412276 SPA1118 - rtT RNA gene
1189381 1189462 - 82 56412276 SPA1119 - 18</sub> Tyr tRNA
1189500 1189581 - 82 56412276 SPA1120 - 18</sub> Tyr tRNA
1296971 1297044 + 74 56412276 SPA1229 - C0343; sRNA gene
1303435 1303545 + 111 56412276 SPA1235 - IS063; sRNA gene
1510488 1510561 + 74 56412276 SPA1429 - 13</sub> Val tRNA
1510575 1510648 + 74 56412276 SPA1430 - 13</sub> Val tRNA
1562118 1562184 - 67 56412276 SPA1487 - rydB; sRNA gene
1567673 1567779 - 107 56412276 SPA1492 - rprA; sRNA gene
1645915 1645987 + 73 56412276 SPA1572 - sraI; sRNA gene
1653142 1653215 - 74 56412276 SPA1584 - 11</sub> Arg tRNA
1663379 1663452 - 74 56412276 SPA1597 - 11</sub> Arg tRNA
1724955 1725120 - 166 56412276 SPA1662 - sraB; sRNA gene
1774048 1774132 + 85 56412276 SPA1717 - 08</sub> Ser tRNA
1822918 1823002 - 85 56412276 SPA1764 - 08</sub> Ser tRNA
1925006 1925090 + 85 56412276 SPA1849 - 08</sub> Ser tRNA
2070950 2071022 - 73 56412276 SPA1988 - 10</sub> Lys tRNA
2071161 2071233 - 73 56412276 SPA1989 - 10</sub> Lys tRNA
2071379 2071451 - 73 56412276 SPA1990 - 10</sub> Lys tRNA
2071458 2071530 - 73 56412276 SPA1991 - 13</sub> Val tRNA
2071670 2071742 - 73 56412276 SPA1992 - 10</sub> Lys tRNA
2152041 2152114 + 74 56412276 SPA2062 - 16</sub> Met tRNA
2152128 2152209 + 82 56412276 SPA2063 - 15</sub> Leu tRNA
2152236 2152307 + 72 56412276 SPA2064 - 05</sub> Gln tRNA
2152346 2152417 + 72 56412276 SPA2065 - 05</sub> Gln tRNA
2152436 2152509 + 74 56412276 SPA2066 - 16</sub> Met tRNA
2152559 2152630 + 72 56412276 SPA2067 - 05</sub> Gln tRNA
2152677 2152748 + 72 56412276 SPA2068 - 05</sub> Gln tRNA
2260936 2261009 - 74 56412276 SPA2172 - 11</sub> Arg tRNA
2348922 2349059 - 138 56412276 SPA2255 - 4.5S_RNA
2527600 2527672 - 73 56412276 SPA2432 - 12</sub> Thr tRNA
2604686 2604759 - 74 56412276 SPA2504 - 06</sub> Asp tRNA
2614126 2614199 - 74 56412276 SPA2515 - 06</sub> Asp tRNA
2614386 2614508 - 123 56412276 SPA2516 - 5S ribosomal RNA
2614703 2617610 - 2908 56412276 SPA2517 - 23S ribosomal RNA
2617807 2617879 - 73 56412276 SPA2519 - 04</sub> Glu tRNA
2617962 2619506 - 1545 56412276 SPA2520 - 16S ribosomal RNA
2661644 2662110 + 467 56412276 SPA2552 - 10Sa_RNA
2782679 2782754 + 76 56412276 SPA2676 - sraD; sRNA gene
2785623 2785696 - 74 56412276 SPA2680 - 11</sub> Arg tRNA
2785762 2785835 - 74 56412276 SPA2681 - 11</sub> Arg tRNA
2785900 2785973 - 74 56412276 SPA2682 - 11</sub> Arg tRNA
2785980 2786069 - 90 56412276 SPA2683 - 08</sub> Ser tRNA
2907715 2907813 - 99 56412276 SPA2808 - IS092; sRNA gene
2934332 2934686 + 355 56412276 SPA2830 - csrB; sRNA gene
2952947 2953151 + 205 56412276 SPA2847 - gcvB; sRNA gene
2958694 2958767 + 74 56412276 SPA2854 - 16</sub> Met tRNA
2958800 2958873 + 74 56412276 SPA2855 - 16</sub> Met tRNA
2987955 2988041 - 87 56412276 SPA2876 - sraE; sRNA gene
2987961 2988049 - 89 56412276 SPA2877 - rygB; sRNA gene
3015045 3015115 - 71 56412276 SPA2905 - 01</sub> Gly tRNA
3039718 3039900 + 183 56412276 SPA2930 - ssrS; sRNA gene
3040570 3040713 + 144 56412276 SPA2932 - tp8; sRNA gene
3085505 3085577 + 73 56412276 SPA2979 - 17</sub> Phe tRNA
3189462 3189534 + 73 56412276 SPA3081 - 16</sub> Met tRNA
3202526 3202712 + 187 56412276 SPA3092 - sraF; sRNA gene
3224909 3225283 + 375 56412276 SPA3115 - rnpB RNA gene
3260192 3260361 + 170 56412276 SPA3150 - sraG; sRNA gene
3267261 3267334 - 74 56412276 SPA3157 - 16</sub> Met tRNA
3269222 3269305 - 84 56412276 SPA3159 - 15</sub> Leu tRNA
3297846 3297950 + 105 56412276 SPA3195 - sraH; sRNA gene
3373135 3373254 - 120 56412276 SPA3260 - 5S ribosomal RNA
3373295 3373367 - 73 56412276 SPA3261 - 12</sub> Thr tRNA
3373380 3373499 - 120 56412276 SPA3262 - 5S ribosomal RNA
3373591 3376497 - 2907 56412276 SPA3263 - 23S ribosomal RNA
3376695 3376767 - 73 56412276 SPA3264 - 04</sub> Glu tRNA
3376853 3378394 - 1542 56412276 SPA3265 - 16S ribosomal RNA
3506522 3506615 - 94 56412276 SPA3397 - sraI; sRNA gene
3614032 3614105 - 74 56412276 SPA3491 - 03</sub> Pro tRNA
3736414 3736504 + 91 56412276 SPA3602 - Sec tRNA
3875155 3876696 + 1542 56412276 SPA3728 - 16S ribosomal RNA
3876782 3876854 + 73 56412276 SPA3729 - 04</sub> Glu tRNA
3877051 3879959 + 2909 56412276 SPA3730 - 23S ribosomal RNA
3880051 3880168 + 118 56412276 SPA3732 - 5S ribosomal RNA
3880223 3880296 + 74 56412276 SPA3733 - 06</sub> Asp tRNA
3880308 3880380 + 73 56412276 SPA3734 - 20</sub> Trp tRNA
3919122 3919195 + 74 56412276 SPA3771 - 11</sub> Arg tRNA
3919253 3919325 + 73 56412276 SPA3772 - 09</sub> His tRNA
3919349 3919432 + 84 56412276 SPA3773 - 15</sub> Leu tRNA
3919478 3919551 + 74 56412276 SPA3774 - 03</sub> Pro tRNA
3919861 3920034 + 174 56412276 SPA3775 - sraJ; sRNA gene
3974288 3975829 + 1542 56412276 SPA3828 - 16S ribosomal RNA
3975899 3975972 + 74 56412276 SPA3829 - 14</sub> Ile tRNA
3976085 3976157 + 73 56412276 SPA3830 - 02</sub> Ala tRNA
3976343 3979251 + 2909 56412276 SPA3831 - 23S ribosomal RNA
3979343 3979462 + 120 56412276 SPA3833 - 5S ribosomal RNA
3987144 3987253 - 110 56412276 SPA3841 - spf RNA gene
4116606 4116789 - 184 56412276 SPA3962 - oxyS RNA gene
4124880 4126420 + 1541 56412276 SPA3970 - 16S ribosomal RNA
4126490 4126563 + 74 56412276 SPA3971 - 14</sub> Ile tRNA
4126676 4126748 + 73 56412276 SPA3972 - 02</sub> Ala tRNA
4126934 4129842 + 2909 56412276 SPA3973 - 23S ribosomal RNA
4129935 4130054 + 120 56412276 SPA3975 - 5S ribosomal RNA
4133675 4133747 + 73 56412276 SPA3980 - 12</sub> Thr tRNA
4133759 4133840 + 82 56412276 SPA3981 - 18</sub> Tyr tRNA
4133960 4134031 + 72 56412276 SPA3982 - 01</sub> Gly tRNA
4134041 4134113 + 73 56412276 SPA3983 - 12</sub> Thr tRNA
4166983 4168524 + 1542 56412276 SPA4014 - 16S ribosomal RNA
4168610 4168682 + 73 56412276 SPA4015 - 04</sub> Glu tRNA
4168879 4171788 + 2910 56412276 SPA4016 - 23S ribosomal RNA
4171879 4171998 + 120 56412276 SPA4018 - 5S ribosomal RNA
4256795 4256934 - 140 56412276 SPA4083 - sraL; sRNA gene
4316321 4316393 - 73 56412276 SPA4137 - 17</sub> Phe tRNA
4346248 4346320 + 73 56412276 SPA4169 - 01</sub> Gly tRNA
4346480 4346552 + 73 56412276 SPA4170 - 01</sub> Gly tRNA
4346712 4346784 + 73 56412276 SPA4171 - 01</sub> Gly tRNA
4461042 4461123 + 82 56412276 SPA4287 - 15</sub> Leu tRNA
4543201 4543284 - 84 56412276 SPA4367 - 15</sub> Leu tRNA
4543319 4543402 - 84 56412276 SPA4368 - 15</sub> Leu tRNA
4543433 4543516 - 84 56412276 SPA4369 - 15</sub> Leu tRNA