ФЭНДОМ


   LOCUS       NC_006512            2839318 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Idiomarina loihiensis L2TR, complete genome.
   ACCESSION   NC_006512
   VERSION     NC_006512.1  GI:56459112
   KEYWORDS    .
   SOURCE      Idiomarina loihiensis L2TR
     ORGANISM  Idiomarina loihiensis L2TR
               Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
               Idiomarinaceae; Idiomarina.
   REFERENCE   1  (bases 1 to 2839318)
     AUTHORS   Hou,S., Saw,J.H., Lee,K.S., Freitas,T.A., Belisle,C.,
               Kawarabayasi,Y., Donachie,S.P., Pikina,A., Galperin,M.Y.,
               Koonin,E.V., Makarova,K.S., Omelchenko,M.V., Sorokin,A., Wolf,Y.I.,
               Li,Q.X., Keum,Y.S., Campbell,S., Denery,J., Aizawa,S.I.,
               Shibata,S., Malahoff,A. and Alam,M.
     TITLE     Genome sequence of the deep-sea {gamma}-proteobacterium Idiomarina
               loihiensis reveals amino acid fermentation as a source of carbon
               and energy
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (52), 18036-18041 (2004)
      PUBMED   15596722
   REFERENCE   2  (bases 1 to 2839318)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (09-DEC-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2839318)
     AUTHORS   Hou,S., Saw,J.H., Lee,K.S., Freitas,T.A., Belisle,C.,
               Kawarabayasi,Y., Donachie,S.P., Galperin,M.Y., Koonin,E.V.,
               Makarova,K.S., Omelchenko,M.V., Sorokin,A., Wolf,Y.I., Li,Q.,
               Keum,Y.S., Campbell,S., Denery,J., Aizawa,S.-I., Shibata,S.,
               Malahoff,A. and Alam,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (01-JUL-2004) Microbiology, University of Hawaii at
               Manoa, 2538 The Mall, Snyder 111, Honolulu, HI 96822, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017340.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
51807 51881 + 75 56459112 ILt0047.1 - 11</sub> Arg tRNA
348104 348176 + 73 56459112 ILt0337.1 - 12</sub> Thr tRNA
348199 348280 + 82 56459112 ILt0337.2 - 18</sub> Tyr tRNA
348329 348400 + 72 56459112 ILt0337.3 - 01</sub> Gly tRNA
348416 348488 + 73 56459112 ILt0337.4 - 12</sub> Thr tRNA
349907 349980 + 74 56459112 ILt0338.1 - 20</sub> Trp tRNA
438750 439000 - 251 56459112 IL0425.1 - ribonuclease P RNA
709110 709193 - 84 56459112 ILt0651.1 - 15</sub> Leu tRNA
709222 709292 - 71 56459112 ILt0651.2 - 19</sub> Cys tRNA
709302 709374 - 73 56459112 ILt0651.3 - 01</sub> Gly tRNA
715193 715281 - 89 56459112 ILt0657.1 - 08</sub> Ser tRNA
734230 734303 + 74 56459112 ILt0678.1 - 03</sub> Pro tRNA
883929 884010 + 82 56459112 ILt0827.1 - 18</sub> Tyr tRNA
992588 992661 + 74 56459112 ILt0938.1 - 16</sub> Met tRNA
992684 992765 + 82 56459112 ILt0938.2 - 15</sub> Leu tRNA
992790 992861 + 72 56459112 ILt0938.3 - 05</sub> Gln tRNA
992902 992973 + 72 56459112 ILt0938.4 - 05</sub> Gln tRNA
992991 993074 + 84 56459112 ILt0938.5 - 15</sub> Leu tRNA
1026091 1026164 - 74 56459112 ILt0970.1 - 16</sub> Met tRNA
1026243 1026326 - 84 56459112 ILt0970.2 - 15</sub> Leu tRNA
1074965 1075038 - 74 56459112 ILt1007.1 - 03</sub> Pro tRNA
1075069 1075141 - 73 56459112 ILt1007.2 - 09</sub> His tRNA
1075171 1075244 - 74 56459112 ILt1007.3 - 11</sub> Arg tRNA
1075276 1075349 - 74 56459112 ILt1007.4 - 03</sub> Pro tRNA
1147526 1147610 - 85 56459112 ILt1067.1 - 08</sub> Ser tRNA
1163996 1164068 - 73 56459112 ILt1077.1 - 10</sub> Lys tRNA
1164102 1164174 - 73 56459112 ILt1077.2 - 10</sub> Lys tRNA
1233478 1233551 + 74 56459112 ILt1154.1 - 11</sub> Arg tRNA
1262899 1263017 - 119 56459112 ILr1179.1 - 5S ribosomal RNA
1263305 1266061 - 2757 56459112 ILr1179.2 - 23S ribosomal RNA
1266281 1266353 - 73 56459112 ILt1179.1 - 02</sub> Ala tRNA
1266471 1266544 - 74 56459112 ILt1179.2 - 14</sub> Ile tRNA
1266652 1268197 - 1546 56459112 ILr1179.3 - 16S ribosomal RNA
1304306 1304378 + 73 56459112 ILt1213.1 - 17</sub> Phe tRNA
1376974 1377047 - 74 56459112 ILt1281.1 - 16</sub> Met tRNA
1506314 1506387 + 74 56459112 ILt1404.1 - 13</sub> Val tRNA
1770857 1771115 - 259 56459112 IL2641 - SsrA
1820016 1820089 - 74 56459112 ILt1691.1 - 06</sub> Asp tRNA
1820119 1820192 - 74 56459112 ILt1691.2 - 06</sub> Asp tRNA
1869208 1869281 - 74 56459112 ILt1736.1 - 11</sub> Arg tRNA
1869306 1869379 - 74 56459112 ILt1736.2 - 11</sub> Arg tRNA
1869404 1869493 - 90 56459112 ILt1736.3 - 08</sub> Ser tRNA
1903151 1903223 - 73 56459112 ILt1768.1 - 04</sub> Glu tRNA
1903262 1903334 - 73 56459112 ILt1716.2 - 04</sub> Glu tRNA
1903370 1903442 - 73 56459112 ILt1716.3 - 04</sub> Glu tRNA
1903493 1903565 - 73 56459112 ILt1716.4 - 02</sub> Ala tRNA
1906022 1906094 + 73 56459112 ILt1770.1 - 13</sub> Val tRNA
1906133 1906205 + 73 56459112 ILt1770.2 - 13</sub> Val tRNA
1928016 1928089 + 74 56459112 ILt1791.1 - 07</sub> Asn tRNA
1928115 1928188 + 74 56459112 ILt1791.2 - 07</sub> Asn tRNA
2017169 2017242 - 74 56459112 ILt1885.1 - 20</sub> Trp tRNA
2023643 2023761 - 119 56459112 ILr1888.1 - 5S ribosomal RNA
2024015 2026771 - 2757 56459112 ILr1888.2 - 23S ribosomal RNA
2026991 2027063 - 73 56459112 ILt1888.1 - 02</sub> Ala tRNA
2027326 2027399 - 74 56459112 ILt1888.2 - 14</sub> Ile tRNA
2027508 2029052 - 1545 56459112 ILr1888.3 - 16S ribosomal RNA
2069910 2069992 - 83 56459112 ILt1944.1 - 15</sub> Leu tRNA
2235800 2235987 + 188 56459112 IL2642 - SsrS
2347520 2347592 - 73 56459112 ILt2197.1 - 16</sub> Met tRNA
2432416 2432538 - 123 56459112 ILr2271.1 - 5S ribosomal RNA
2432826 2435583 - 2758 56459112 ILr2271.2 - 23S ribosomal RNA
2435803 2435875 - 73 56459112 ILt2271.1 - 02</sub> Ala tRNA
2436138 2436211 - 74 56459112 ILt2271.2 - 14</sub> Ile tRNA
2436320 2437864 - 1545 56459112 ILr2271.3 - 16S ribosomal RNA
2465248 2465320 - 73 56459112 ILt2299.1 - 01</sub> Gly tRNA
2465355 2465427 - 73 56459112 ILt2299.2 - 01</sub> Gly tRNA
2748761 2748879 - 119 56459112 ILr2563.1 - 5S ribosomal RNA
2749167 2751925 - 2759 56459112 ILr2563.2 - 23S ribosomal RNA
2752144 2752216 - 73 56459112 ILt2563.1 - 02</sub> Ala tRNA
2752479 2752552 - 74 56459112 ILt2563.2 - 14</sub> Ile tRNA
2752660 2754205 - 1546 56459112 ILr2563.3 - 16S ribosomal RNA