ФЭНДОМ


   LOCUS       NC_006576            2696255 bp    DNA     circular BCT 23-JAN-2007
   DEFINITION  Synechococcus elongatus PCC 6301, complete genome.
   ACCESSION   NC_006576
   VERSION     NC_006576.1  GI:56750010
   KEYWORDS    .
   SOURCE      Synechococcus elongatus PCC 6301
     ORGANISM  Synechococcus elongatus PCC 6301
               Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
   REFERENCE   1  (bases 1 to 2696255)
     AUTHORS   Sugita,C., Ogata,K., Shikata,M., Jikuya,H., Takano,J.,
               Furumichi,M., Kanehisa,M., Omata,T., Sugiura,M. and Sugita,M.
     TITLE     Complete nucleotide sequence of the freshwater unicellular
               cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene
               content and organization
     JOURNAL   (er) Photosyn. Res. (2007) In press
      PUBMED   17211581
   REFERENCE   2  (bases 1 to 2696255)
     AUTHORS   Maeda,S., Sugita,C., Sugita,M. and Omata,T.
     TITLE     A new class of signal transducer in His-Asp phosphorelay systems
     JOURNAL   J. Biol. Chem. 281 (49), 37868-37876 (2006)
      PUBMED   17040912
   REFERENCE   3  (bases 1 to 2696255)
     AUTHORS   Takai,N., Nakajima,M., Oyama,T., Kito,R., Sugita,C., Sugita,M.,
               Kondo,T. and Iwasaki,H.
     TITLE     A KaiC-associating SasA-RpaA two-component regulatory system as a
               major circadian timing mediator in cyanobacteria
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (32), 12109-12114 (2006)
      PUBMED   16882723
   REFERENCE   4  (bases 1 to 2696255)
     AUTHORS   Maeda,S., Sugita,C., Sugita,M. and Omata,T.
     TITLE     Latent nitrate transport activity of a novel sulfate permease-like
               protein of the cyanobacterium Synechococcus elongatus
     JOURNAL   J. Biol. Chem. 281 (9), 5869-5876 (2006)
      PUBMED   16407232
   REFERENCE   5  (bases 1 to 2696255)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (21-DEC-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   6  (bases 1 to 2696255)
     AUTHORS   Sugita,M. and Sugita,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-DEC-2004) Mamoru Sugita, Center for Gene Research,
               Nagoya University; Chikusaku Furo-cho, Nagoya, Aichi, 464-8602,
               Japan (E-mail:sugita@gene.nagoya-u.ac.jp, Tel:81-52-789-3080,
               Fax:81-52-789-3080)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP008231.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
23767 23838 - 72 56750010 sycRNA001_c - 01</sub> Gly tRNA
123823 123894 - 72 56750010 sycRNA002_c - 10</sub> Lys tRNA
137979 138183 - 205 56750010 sycRNA003_c - 6Sa RNA
199481 199562 + 82 56750010 sycRNA004_d - 15</sub> Leu tRNA
372254 372325 + 72 56750010 sycRNA005_d - 13</sub> Val tRNA
445763 445836 - 74 56750010 sycRNA006_c - 03</sub> Pro tRNA
450030 450103 + 74 56750010 sycRNA007_d - 03</sub> Pro tRNA
631076 631466 + 391 56750010 sycRNA008_d - tmRNA
697493 697564 - 72 56750010 sycRNA009_c - 12</sub> Thr tRNA
697575 697656 - 82 56750010 sycRNA010_c - 18</sub> Tyr tRNA
712463 712534 - 72 56750010 sycRNA011_c - 12</sub> Thr tRNA
909561 909644 - 84 56750010 sycRNA012_c - 15</sub> Leu tRNA
911178 911261 + 84 56750010 sycRNA013_d - 15</sub> Leu tRNA
947359 947430 - 72 56750010 sycRNA014_c - 13</sub> Val tRNA
1000429 1000500 - 72 56750010 sycRNA015_c - 05</sub> Gln tRNA
1033090 1033161 - 72 56750010 sycRNA016_c - 16</sub> Met tRNA
1047189 1047308 - 120 56750010 sycRNA017_c - 5S ribosomal RNA
1047378 1050255 - 2878 56750010 sycRNA018_c - 23S ribosomal RNA
1050460 1050532 - 73 56750010 sycRNA019_c - 02</sub> Ala tRNA
1050566 1050639 - 74 56750010 sycRNA020_c - 14</sub> Ile tRNA
1050801 1052289 - 1489 56750010 sycRNA021_c - 16S ribosomal RNA
1065591 1065661 - 71 56750010 sycRNA022_c - 01</sub> Gly tRNA
1195896 1195969 + 74 56750010 sycRNA023_d - 11</sub> Arg tRNA
1216906 1216955 - 50 56750010 sycRNA024_c - 15</sub> Leu tRNA
1217196 1217229 - 34 56750010 sycRNA024_c - 15</sub> Leu tRNA
1332652 1332724 + 73 56750010 sycRNA025_d - 02</sub> Ala tRNA
1400885 1400958 - 74 56750010 sycRNA026_c - 03</sub> Pro tRNA
1454275 1454351 - 77 56750010 sycRNA027_c - 16</sub> Met tRNA
1496872 1496942 - 71 56750010 sycRNA028_c - 19</sub> Cys tRNA
1499530 1499600 - 71 56750010 sycRNA029_c - 19</sub> Cys tRNA
1533086 1533157 + 72 56750010 sycRNA030_d - 07</sub> Asn tRNA
1640108 1640180 + 73 56750010 sycRNA031_d - 16</sub> Met tRNA
1649862 1649948 + 87 56750010 sycRNA032_d - 08</sub> Ser tRNA
1656455 1657943 + 1489 56750010 sycRNA033_d - 16S ribosomal RNA
1658105 1658178 + 74 56750010 sycRNA034_d - 14</sub> Ile tRNA
1658212 1658284 + 73 56750010 sycRNA035_d - 02</sub> Ala tRNA
1658489 1661366 + 2878 56750010 sycRNA036_d - 23S ribosomal RNA
1661436 1661555 + 120 56750010 sycRNA037_d - 5S ribosomal RNA
1693622 1693695 - 74 56750010 sycRNA038_c - 06</sub> Asp tRNA
1693902 1693974 - 73 56750010 sycRNA039_c - 20</sub> Trp tRNA
1720128 1720200 - 73 56750010 sycRNA040_c - 02</sub> Ala tRNA
1778303 1778389 - 87 56750010 sycRNA041_c - 08</sub> Ser tRNA
1802971 1803052 - 82 56750010 sycRNA042_c - 15</sub> Leu tRNA
1838442 1838514 - 73 56750010 sycRNA043_c - 17</sub> Phe tRNA
1869031 1869124 + 94 56750010 sycRNA044_d - signal recognition particle RNA
1883462 1883534 - 73 56750010 sycRNA045_c - 09</sub> His tRNA
1937495 1937568 + 74 56750010 sycRNA046_d - 11</sub> Arg tRNA
1973374 1973446 - 73 56750010 sycRNA047_c - 11</sub> Arg tRNA
1998647 1998719 - 73 56750010 sycRNA048_c - 11</sub> Arg tRNA
2007303 2007374 + 72 56750010 sycRNA049_d - 01</sub> Gly tRNA
2035741 2035829 + 89 56750010 sycRNA050_d - 08</sub> Ser tRNA
2120875 2120947 - 73 56750010 sycRNA051_c - 04</sub> Glu tRNA
2231507 2231578 + 72 56750010 sycRNA052_d - 12</sub> Thr tRNA
2291672 2291756 - 85 56750010 sycRNA053_c - 08</sub> Ser tRNA
2603729 2604112 - 384 56750010 sycRNA054_c - ribonuclease P RNA component
2654471 2654542 + 72 56750010 sycRNA055_d - 13</sub> Val tRNA