ФЭНДОМ


   LOCUS       NC_006582            4303871 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Bacillus clausii KSM-K16, complete genome.
   ACCESSION   NC_006582
   VERSION     NC_006582.1  GI:56961782
   KEYWORDS    .
   SOURCE      Bacillus clausii KSM-K16
     ORGANISM  Bacillus clausii KSM-K16
               Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
   REFERENCE   1
     AUTHORS   Shirai,T., Suzuki,A., Yamane,T., Ashida,T., Kobayashi,T., Hitomi,J.
               and Ito,S.
     TITLE     High-resolution crystal structure of M-protease: phylogeny aided
               analysis of the high-alkaline adaptation mechanism
     JOURNAL   Protein Eng. 10 (6), 627-634 (1997)
      PUBMED   9278275
   REFERENCE   2
     AUTHORS   Kobayashi,T., Hakamada,Y., Adachi,S., Hitomi,J., Yoshimatsu,T.,
               Koike,K., Kawai,S. and Ito,S.
     TITLE     Purification and properties of an alkaline protease from
               alkalophilic Bacillus sp. KSM-K16
     JOURNAL   Appl. Microbiol. Biotechnol. 43 (3), 473-481 (1995)
      PUBMED   7632397
   REFERENCE   3
     AUTHORS   Hakamada,Y., Kobayashi,T., Hitomi,J., Kawai,S. and Ito,S.
     TITLE     Molecular cloning and nucleotide sequence of the gene for an
               alkaline protease from the alkalophilic Bacillus sp. KSM-K16
     JOURNAL   J. Ferment. Bioeng. 78, 105-108 (1994)
   REFERENCE   4
     AUTHORS   Takaki,Y., Kageyama,Y., Shimamura,S., Suzuki,H., Nishi,S.,
               Hatada,Y., Kawai,S., Ito,S. and Horikoshi,K.
     TITLE     The complete genome sequence of the alkaliphilic Bacillus clausii
               KSM-K16
     JOURNAL   Unpublished
   REFERENCE   5  (bases 1 to 4303871)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (03-JAN-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   6  (bases 1 to 4303871)
     AUTHORS   Takaki,Y., Kageyama,Y., Shimamura,S., Suzuki,H., Nishi,S.,
               Hatada,Y., Kawai,S., Ito,S. and Horikoshi,K.
     TITLE     Direct Submission
     JOURNAL   Submitted (19-OCT-2003) Biological Science Laboratories, Kao
               Corporation, 2606 Akabane, Ichikai-machi, Haga-gun, Tochigi
               321-3497,, Japan
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP006627.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
11675 13227 + 1553 56961782 ABCr01 - ribosomal RNA-16S
13559 16361 + 2803 56961782 ABCr02 - ribosomal RNA-23S
16733 16848 + 116 56961782 ABCr03 - ribosomal RNA-5S
52364 53916 + 1553 56961782 ABCr04 - ribosomal RNA-16S
54372 57174 + 2803 56961782 ABCr05 - ribosomal RNA-23S
57448 57563 + 116 56961782 ABCr06 - ribosomal RNA-5S
115582 115655 + 74 56961782 ABCt01 - 16</sub> Met tRNA
136407 137957 + 1551 56961782 ABCr07 - ribosomal RNA-16S
138412 141215 + 2804 56961782 ABCr08 - ribosomal RNA-23S
141700 141815 + 116 56961782 ABCr09 - ribosomal RNA-5S
141833 141908 + 76 56961782 ABCt02 - 13</sub> Val tRNA
142043 142118 + 76 56961782 ABCt03 - 12</sub> Thr tRNA
142137 142212 + 76 56961782 ABCt04 - 10</sub> Lys tRNA
142225 142307 + 83 56961782 ABCt05 - 15</sub> Leu tRNA
142327 142398 + 72 56961782 ABCt06 - 01</sub> Gly tRNA
142418 142503 + 86 56961782 ABCt07 - 15</sub> Leu tRNA
142523 142599 + 77 56961782 ABCt08 - 11</sub> Arg tRNA
142604 142680 + 77 56961782 ABCt09 - 03</sub> Pro tRNA
142688 142763 + 76 56961782 ABCt10 - 02</sub> Ala tRNA
142939 144489 + 1551 56961782 ABCr10 - ribosomal RNA-16S
144821 147624 + 2804 56961782 ABCr11 - ribosomal RNA-23S
148117 148232 + 116 56961782 ABCr12 - ribosomal RNA-5S
218075 219625 + 1551 56961782 ABCr13 - ribosomal RNA-16S
220080 222882 + 2803 56961782 ABCr14 - ribosomal RNA-23S
223378 223493 + 116 56961782 ABCr15 - ribosomal RNA-5S
223516 223590 + 75 56961782 ABCt11 - 07</sub> Asn tRNA
223598 223670 + 73 56961782 ABCt12 - 12</sub> Thr tRNA
263085 263156 + 72 56961782 ABCt13 - 04</sub> Glu tRNA
263229 263340 + 112 56961782 ABCr16 - ribosomal RNA-5S
263454 263529 + 76 56961782 ABCt14 - 13</sub> Val tRNA
263553 263637 + 85 56961782 ABCt15 - 18</sub> Tyr tRNA
263650 263724 + 75 56961782 ABCt16 - 05</sub> Gln tRNA
263728 263800 + 73 56961782 ABCt17 - 10</sub> Lys tRNA
263849 263924 + 76 56961782 ABCt18 - 02</sub> Ala tRNA
890651 890725 + 75 56961782 ABCt19 - 07</sub> Asn tRNA
890727 890814 + 88 56961782 ABCt20 - 08</sub> Ser tRNA
890822 890893 + 72 56961782 ABCt21 - 04</sub> Glu tRNA
891276 891351 + 76 56961782 ABCt22 - 13</sub> Val tRNA
891359 891435 + 77 56961782 ABCt23 - 06</sub> Asp tRNA
891461 891546 + 86 56961782 ABCt24 - 15</sub> Leu tRNA
891553 891637 + 85 56961782 ABCt25 - 15</sub> Leu tRNA
932932 933008 + 77 56961782 ABCt26 - 11</sub> Arg tRNA
933012 933088 + 77 56961782 ABCt27 - 03</sub> Pro tRNA
933276 933349 + 74 56961782 ABCt28 - 01</sub> Gly tRNA
933381 933457 + 77 56961782 ABCt29 - 14</sub> Ile tRNA
933638 935188 + 1551 56961782 ABCr17 - ribosomal RNA-16S
935504 935580 + 77 56961782 ABCt30 - 14</sub> Ile tRNA
935596 935671 + 76 56961782 ABCt31 - 02</sub> Ala tRNA
935921 938723 + 2803 56961782 ABCr18 - ribosomal RNA-23S
939096 939211 + 116 56961782 ABCr19 - ribosomal RNA-5S
943808 943881 + 74 56961782 ABCt32 - 16</sub> Met tRNA
1440581 1442131 + 1551 56961782 ABCr20 - ribosomal RNA-16S
1442780 1445583 + 2804 56961782 ABCr21 - ribosomal RNA-23S
1446077 1446192 + 116 56961782 ABCr22 - ribosomal RNA-5S
1446204 1446278 + 75 56961782 ABCt33 - 07</sub> Asn tRNA
1446282 1446375 + 94 56961782 ABCt34 - 08</sub> Ser tRNA
1446388 1446462 + 75 56961782 ABCt35 - 04</sub> Glu tRNA
1446499 1446574 + 76 56961782 ABCt36 - 13</sub> Val tRNA
1447011 1447087 + 77 56961782 ABCt37 - 16</sub> Met tRNA
1447105 1447181 + 77 56961782 ABCt38 - 06</sub> Asp tRNA
1447194 1447269 + 76 56961782 ABCt39 - 17</sub> Phe tRNA
1447283 1447358 + 76 56961782 ABCt40 - 12</sub> Thr tRNA
1447423 1447507 + 85 56961782 ABCt41 - 18</sub> Tyr tRNA
1447515 1447588 + 74 56961782 ABCt42 - 20</sub> Trp tRNA
1447619 1447695 + 77 56961782 ABCt43 - 09</sub> His tRNA
1447708 1447781 + 74 56961782 ABCt44 - 05</sub> Gln tRNA
1447785 1447856 + 72 56961782 ABCt45 - 01</sub> Gly tRNA
1447868 1447941 + 74 56961782 ABCt46 - 19</sub> Cys tRNA
1447971 1448056 + 86 56961782 ABCt47 - 15</sub> Leu tRNA
1448083 1448156 + 74 56961782 ABCt48 - 11</sub> Arg tRNA
1450811 1450892 + 82 56961782 ABCt49 - 15</sub> Leu tRNA
1841973 1842047 + 75 56961782 ABCt50 - 07</sub> Asn tRNA
1842050 1842126 + 77 56961782 ABCt51 - 16</sub> Met tRNA
1842157 1842232 + 76 56961782 ABCt52 - 09</sub> His tRNA
1842250 1842323 + 74 56961782 ABCt53 - 16</sub> Met tRNA
1842328 1842417 + 90 56961782 ABCt54 - 08</sub> Ser tRNA
2571148 2571220 - 73 56961782 ABCt55 - 13</sub> Val tRNA
2573822 2573894 - 73 56961782 ABCt56 - 11</sub> Arg tRNA
2626662 2626745 - 84 56961782 ABCt57 - 15</sub> Leu tRNA
2626772 2626862 - 91 56961782 ABCt58 - 08</sub> Ser tRNA
2626894 2626970 - 77 56961782 ABCt59 - 14</sub> Ile tRNA
2626986 2627056 - 71 56961782 ABCt60 - 01</sub> Gly tRNA
2627239 2627310 - 72 56961782 ABCt61 - 01</sub> Gly tRNA
2627314 2627388 - 75 56961782 ABCt62 - 05</sub> Gln tRNA
2627394 2627470 - 77 56961782 ABCt63 - 16</sub> Met tRNA
2627752 2627844 - 93 56961782 ABCt64 - 08</sub> Ser tRNA
2627852 2627924 - 73 56961782 ABCt65 - 02</sub> Ala tRNA
2781202 2781278 - 77 56961782 ABCt66 - 11</sub> Arg tRNA
2781284 2781357 - 74 56961782 ABCt67 - 01</sub> Gly tRNA
3031151 3031223 - 73 56961782 ABCt68 - 02</sub> Ala tRNA
3447112 3447185 + 74 56961782 ABCt69 - 11</sub> Arg tRNA
4281481 4281553 - 73 56961782 ABCt70 - 12</sub> Thr tRNA
4281557 4281632 - 76 56961782 ABCt71 - 17</sub> Phe tRNA
4281669 4281745 - 77 56961782 ABCt72 - 06</sub> Asp tRNA
4281769 4281840 - 72 56961782 ABCt73 - 04</sub> Glu tRNA
4281851 4281926 - 76 56961782 ABCt74 - 10</sub> Lys tRNA