LOCUS NC_006814 1993561 bp DNA circular BCT 02-FEB-2007
DEFINITION Lactobacillus acidophilus NCFM, complete genome.
ACCESSION NC_006814
VERSION NC_006814.2 GI:124388246
KEYWORDS .
SOURCE Lactobacillus acidophilus NCFM
ORGANISM Lactobacillus acidophilus NCFM
Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;
Lactobacillus.
REFERENCE 1 (bases 1 to 1993561)
AUTHORS Altermann,E., Russell,W.M., Azcarate-Peril,M.A., Barrangou,R.,
Buck,B.L., McAuliffe,O., Souther,N., Dobson,A., Duong,T.,
Callanan,M., Lick,S., Hamrick,A., Cano,R. and Klaenhammer,T.R.
TITLE Complete genome sequence of the probiotic lactic acid bacterium
Lactobacillus acidophilus NCFM
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 102 (11), 3906-3912 (2005)
PUBMED 15671160
REFERENCE 2 (bases 1 to 1993561)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1993561)
AUTHORS Altermann,E., Russell,W.M., Azcarate-Peril,M.A., Barrangou,R.,
Buck,B.L., McAuliffe,O., Souther,N., Dobson,A., Duong,T.,
Callanan,M., Lick,S., Hamrick,A., Cano,R. and Klaenhammer,T.R.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2004) Department of Food Science, North Carolina
State University, Raleigh, NC 27695-7624, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000033.
On Feb 2, 2007 this sequence version replaced gi:58336354.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 19474 | 19546 | + | 73 | 124388246 | LBA2000 | - | 12 Thr tRNA |
| 59255 | 60826 | + | 1572 | 124388246 | LBA2001 | - | 16S ribosomal RNA |
| 60957 | 64007 | + | 3051 | 124388246 | LBA2002 | - | 23S ribosomal RNA |
| 63998 | 64114 | + | 117 | 124388246 | LBA2003 | - | 5S ribosomal RNA |
| 64127 | 64199 | + | 73 | 124388246 | LBA2004 | - | 07 Asn tRNA |
| 79456 | 79528 | + | 73 | 124388246 | LBA2005 | - | 10 Lys tRNA |
| 79704 | 79776 | + | 73 | 124388246 | LBA2006 | - | 10 Lys tRNA |
| 189006 | 189078 | + | 73 | 124388246 | LBA2007 | - | 12 Thr tRNA |
| 203489 | 203559 | + | 71 | 124388246 | LBA2008 | - | 01 Gly tRNA |
| 275354 | 275428 | + | 75 | 124388246 | LBA2009 | - | 01 Gly tRNA |
| 275551 | 275625 | + | 75 | 124388246 | LBA2010 | - | 01 Gly tRNA |
| 275660 | 275733 | + | 74 | 124388246 | LBA2011 | - | 03 Pro tRNA |
| 413779 | 415350 | + | 1572 | 124388246 | LBA2012 | - | 16S ribosomal RNA |
| 415471 | 415545 | + | 75 | 124388246 | LBA2013 | - | 14 Ile tRNA |
| 415602 | 415674 | + | 73 | 124388246 | LBA2014 | - | 02 Ala tRNA |
| 415728 | 418779 | + | 3052 | 124388246 | LBA2015 | - | 23S ribosomal RNA |
| 418770 | 418886 | + | 117 | 124388246 | LBA2016 | - | 5S ribosomal RNA |
| 418890 | 418962 | + | 73 | 124388246 | LBA2017 | - | 13 Val tRNA |
| 418965 | 419037 | + | 73 | 124388246 | LBA2018 | - | 10 Lys tRNA |
| 419050 | 419131 | + | 82 | 124388246 | LBA2019 | - | 15 Leu tRNA |
| 419156 | 419228 | + | 73 | 124388246 | LBA2020 | - | 12 Thr tRNA |
| 419239 | 419310 | + | 72 | 124388246 | LBA2021 | - | 01 Gly tRNA |
| 419323 | 419408 | + | 86 | 124388246 | LBA2022 | - | 15 Leu tRNA |
| 419417 | 419490 | + | 74 | 124388246 | LBA2023 | - | 11 Arg tRNA |
| 419496 | 419569 | + | 74 | 124388246 | LBA2024 | - | 03 Pro tRNA |
| 419600 | 419673 | + | 74 | 124388246 | LBA2025 | - | 16 Met tRNA |
| 419686 | 419759 | + | 74 | 124388246 | LBA2026 | - | 16 Met tRNA |
| 419776 | 419849 | + | 74 | 124388246 | LBA2027 | - | 16 Met tRNA |
| 419853 | 419926 | + | 74 | 124388246 | LBA2028 | - | 06 Asp tRNA |
| 419933 | 420005 | + | 73 | 124388246 | LBA2029 | - | 17 Phe tRNA |
| 420025 | 420095 | + | 71 | 124388246 | LBA2030 | - | 01 Gly tRNA |
| 420101 | 420175 | + | 75 | 124388246 | LBA2031 | - | 14 Ile tRNA |
| 420178 | 420267 | + | 90 | 124388246 | LBA2032 | - | 08 Ser tRNA |
| 423962 | 424033 | + | 72 | 124388246 | LBA2033 | - | 04 Glu tRNA |
| 424071 | 424157 | + | 87 | 124388246 | LBA2034 | - | 08 Ser tRNA |
| 424167 | 424240 | + | 74 | 124388246 | LBA2035 | - | 16 Met tRNA |
| 424244 | 424317 | + | 74 | 124388246 | LBA2036 | - | 06 Asp tRNA |
| 424324 | 424399 | + | 76 | 124388246 | LBA2037 | - | 17 Phe tRNA |
| 424404 | 424485 | + | 82 | 124388246 | LBA2038 | - | 18 Tyr tRNA |
| 424490 | 424560 | + | 71 | 124388246 | LBA2039 | - | 20 Trp tRNA |
| 424573 | 424648 | + | 76 | 124388246 | LBA2040 | - | 09 His tRNA |
| 424653 | 424724 | + | 72 | 124388246 | LBA2041 | - | 05 Gln tRNA |
| 424748 | 424818 | + | 71 | 124388246 | LBA2042 | - | 19 Cys tRNA |
| 424856 | 424940 | + | 85 | 124388246 | LBA2043 | - | 15 Leu tRNA |
| 434247 | 435818 | + | 1572 | 124388246 | LBA2044 | - | 16S ribosomal RNA |
| 435949 | 438999 | + | 3051 | 124388246 | LBA2045 | - | 23S ribosomal RNA |
| 438990 | 439106 | + | 117 | 124388246 | LBA2046 | - | 5S ribosomal RNA |
| 439119 | 439191 | + | 73 | 124388246 | LBA2047 | - | 07 Asn tRNA |
| 463546 | 463618 | + | 73 | 124388246 | LBA2048 | - | 12 Thr tRNA |
| 497137 | 497208 | + | 72 | 124388246 | LBA2049 | - | 05 Gln tRNA |
| 500651 | 500732 | + | 82 | 124388246 | LBA2050 | - | 18 Tyr tRNA |
| 500767 | 500838 | + | 72 | 124388246 | LBA2051 | - | 05 Gln tRNA |
| 514446 | 514533 | + | 88 | 124388246 | LBA2052 | - | 15 Leu tRNA |
| 538938 | 539024 | + | 87 | 124388246 | LBA2053 | - | 08 Ser tRNA |
| 539031 | 539104 | + | 74 | 124388246 | LBA2054 | - | 06 Asp tRNA |
| 539111 | 539186 | + | 76 | 124388246 | LBA2055 | - | 09 His tRNA |
| 539191 | 539263 | + | 73 | 124388246 | LBA2056 | - | 13 Val tRNA |
| 606705 | 606777 | + | 73 | 124388246 | LBA2057 | - | 11 Arg tRNA |
| 691550 | 691621 | + | 72 | 124388246 | LBA2058 | - | 11 Arg tRNA |
| 743039 | 743110 | + | 72 | 124388246 | LBA2059 | - | 04 Glu tRNA |
| 743116 | 743188 | + | 73 | 124388246 | LBA2060 | - | 05 Gln tRNA |
| 870429 | 870517 | + | 89 | 124388246 | LBA2061 | - | 08 Ser tRNA |
| 1326825 | 1326901 | + | 77 | 124388246 | LBA2062 | - | 11 Arg tRNA |
| 1597744 | 1597827 | + | 84 | 124388246 | LBA2063 | - | 15 Leu tRNA |
| 1626607 | 1626679 | + | 73 | 124388246 | LBA2064 | - | 13 Val tRNA |
| 1626685 | 1626756 | + | 72 | 124388246 | LBA2065 | - | 04 Glu tRNA |
| 1627662 | 1627752 | + | 91 | 124388246 | LBA2066 | - | 08 Ser tRNA |
| 1627764 | 1627836 | + | 73 | 124388246 | LBA2067 | - | 07 Asn tRNA |
| 1627849 | 1627965 | - | 117 | 124388246 | LBA2068 | - | 5S ribosomal RNA |
| 1627956 | 1631004 | - | 3049 | 124388246 | LBA2069 | - | 23S ribosomal RNA |
| 1630740 | 1632557 | - | 1818 | 124388246 | LBA2070 | - | 23S ribosomal RNA |
| 1632690 | 1634261 | - | 1572 | 124388246 | LBA2071 | - | 16S ribosomal RNA |
| 1904687 | 1904760 | + | 74 | 124388246 | LBA2072 | - | 11 Arg tRNA |
| 1904770 | 1904843 | + | 74 | 124388246 | LBA2073 | - | 03 Pro tRNA |