ФЭНДОМ


   LOCUS       NC_006840            2906179 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Vibrio fischeri ES114 chromosome I, complete sequence.
   ACCESSION   NC_006840
   VERSION     NC_006840.1  GI:59710607
   KEYWORDS    .
   SOURCE      Vibrio fischeri ES114
     ORGANISM  Vibrio fischeri ES114
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Vibrio.
   REFERENCE   1  (bases 1 to 2906179)
     AUTHORS   Ruby,E.G., Urbanowski,M., Campbell,J., Dunn,A., Faini,M.,
               Gunsalus,R., Lostroh,P., Lupp,C., McCann,J., Millikan,D.,
               Schaefer,A., Stabb,E., Stevens,A., Visick,K., Whistler,C. and
               Greenberg,E.P.
     TITLE     Complete genome sequence of Vibrio fischeri: a symbiotic bacterium
               with pathogenic congeners
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (8), 3004-3009 (2005)
      PUBMED   15703294
   REFERENCE   2  (bases 1 to 2906179)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (14-FEB-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2906179)
     AUTHORS   Ruby,E.G., Urbanowski,M., Campbell,J.W., Dunn,A., Faini,M.A.,
               Gunsalus,R.P., Lostroh,P., Lupp,C., McCann,J.R., Millikan,D.S.,
               Schaefer,A.L., Stabb,E.V., Stevens,A.M., Visick,K.L., Whistler,C.A.
               and Greenberg,E.P.
     TITLE     Direct Submission
     JOURNAL   Submitted (16-SEP-2004) Kewalo Marine Laboratory, and W.M. Keck
               Microbial Communities and Cell Signaling Program, University of
               Hawaii, Honolulu, HI 96081, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000020.
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
31800 31876 + 77 59710607 VFT0001 - 20</sub> Trp tRNA
347254 348800 + 1547 59710607 VFR0001 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
348868 348943 + 76 59710607 VFT0002 - 04</sub> Glu tRNA
349219 352109 + 2891 59710607 VFR0002 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
352203 352323 + 121 59710607 VFR0003 - 5S RNA
352727 354272 + 1546 59710607 VFR0004 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
354342 354418 + 77 59710607 VFT0003 - 14</sub> Ile tRNA
354456 354531 + 76 59710607 VFT0004 - 02</sub> Ala tRNA
354805 357695 + 2891 59710607 VFR0005 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
357784 357904 + 121 59710607 VFR0006 - 5S RNA
357934 358010 + 77 59710607 VFT0005 - 06</sub> Asp tRNA
447875 447959 + 85 59710607 VFT0006 - 15</sub> Leu tRNA
448881 448956 - 76 59710607 VFT0007 - 07</sub> Asn tRNA
448963 449038 - 76 59710607 VFT0008 - 17</sub> Phe tRNA
449046 449121 - 76 59710607 VFT0009 - 12</sub> Thr tRNA
449195 449270 - 76 59710607 VFT0010 - 07</sub> Asn tRNA
449304 449379 - 76 59710607 VFT0011 - 12</sub> Thr tRNA
449421 449496 - 76 59710607 VFT0012 - 07</sub> Asn tRNA
449503 449578 - 76 59710607 VFT0013 - 17</sub> Phe tRNA
449586 449661 - 76 59710607 VFT0014 - 12</sub> Thr tRNA
449737 449812 - 76 59710607 VFT0015 - 17</sub> Phe tRNA
519278 519362 + 85 59710607 VFT0016 - 15</sub> Leu tRNA
583353 583444 + 92 59710607 VFT0017 - 08</sub> Ser tRNA
583498 583574 + 77 59710607 VFT0018 - 11</sub> Arg tRNA
583614 583705 + 92 59710607 VFT0019 - 08</sub> Ser tRNA
583756 583832 + 77 59710607 VFT0020 - 11</sub> Arg tRNA
583900 583976 + 77 59710607 VFT0021 - 11</sub> Arg tRNA
584044 584120 + 77 59710607 VFT0022 - 11</sub> Arg tRNA
584188 584264 + 77 59710607 VFT0023 - 11</sub> Arg tRNA
584811 584887 + 77 59710607 VFT0024 - 11</sub> Arg tRNA
584952 585028 + 77 59710607 VFT0025 - 11</sub> Arg tRNA
617478 619023 + 1546 59710607 VFR0007 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
619384 622274 + 2891 59710607 VFR0008 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
622367 622487 + 121 59710607 VFR0009 - 5S RNA
622567 622643 + 77 59710607 VFT0026 - 06</sub> Asp tRNA
622680 622756 + 77 59710607 VFT0027 - 20</sub> Trp tRNA
830929 831003 - 75 59710607 VFT0028 - 05</sub> Gln tRNA
831029 831113 - 85 59710607 VFT0029 - 15</sub> Leu tRNA
831199 831275 - 77 59710607 VFT0030 - 16</sub> Met tRNA
831286 831370 - 85 59710607 VFT0031 - 15</sub> Leu tRNA
831451 831525 - 75 59710607 VFT0032 - 05</sub> Gln tRNA
831555 831631 - 77 59710607 VFT0033 - 16</sub> Met tRNA
831642 831726 - 85 59710607 VFT0034 - 15</sub> Leu tRNA
831807 831881 - 75 59710607 VFT0035 - 05</sub> Gln tRNA
831907 831991 - 85 59710607 VFT0036 - 15</sub> Leu tRNA
832072 832146 - 75 59710607 VFT0037 - 05</sub> Gln tRNA
832172 832256 - 85 59710607 VFT0038 - 15</sub> Leu tRNA
832337 832411 - 75 59710607 VFT0039 - 05</sub> Gln tRNA
832437 832521 - 85 59710607 VFT0040 - 15</sub> Leu tRNA
832600 832676 - 77 59710607 VFT0041 - 16</sub> Met tRNA
852745 852821 + 77 59710607 VFT0042 - 03</sub> Pro tRNA
1030930 1031005 - 76 59710607 VFT0043 - 07</sub> Asn tRNA
1031065 1031140 - 76 59710607 VFT0044 - 07</sub> Asn tRNA
1061957 1062044 + 88 59710607 VFT0045 - 08</sub> Ser tRNA
1389613 1389689 + 77 59710607 VFT0046 - 13</sub> Val tRNA
1389767 1389843 + 77 59710607 VFT0047 - 13</sub> Val tRNA
1758426 1758512 - 87 59710607 VFT0048 - 15</sub> Leu tRNA
1758590 1758665 - 76 59710607 VFT0049 - 01</sub> Gly tRNA
1758680 1758753 - 74 59710607 VFT0050 - 19</sub> Cys tRNA
1758794 1758880 - 87 59710607 VFT0051 - 15</sub> Leu tRNA
1758993 1759068 - 76 59710607 VFT0052 - 01</sub> Gly tRNA
1759082 1759155 - 74 59710607 VFT0053 - 19</sub> Cys tRNA
1775883 1775966 + 84 59710607 VFT0054 - 18</sub> Tyr tRNA
1776049 1776132 + 84 59710607 VFT0055 - 18</sub> Tyr tRNA
1776215 1776298 + 84 59710607 VFT0056 - 18</sub> Tyr tRNA
1776381 1776464 + 84 59710607 VFT0057 - 18</sub> Tyr tRNA
1776547 1776630 + 84 59710607 VFT0058 - 18</sub> Tyr tRNA
1827827 1827902 - 76 59710607 VFT0059 - 01</sub> Gly tRNA
1827936 1828022 - 87 59710607 VFT0060 - 15</sub> Leu tRNA
1828100 1828175 - 76 59710607 VFT0061 - 01</sub> Gly tRNA
1828195 1828269 - 75 59710607 VFT0062 - 19</sub> Cys tRNA
1862531 1862621 + 91 59710607 VFT0063 - 08</sub> Ser tRNA
1862660 1862736 + 77 59710607 VFT0064 - 06</sub> Asp tRNA
1863827 1863917 + 91 59710607 VFT0065 - 08</sub> Ser tRNA
1864254 1864344 + 91 59710607 VFT0066 - 08</sub> Ser tRNA
1999181 1999257 - 77 59710607 VFT0067 - 11</sub> Arg tRNA
2374361 2374437 - 77 59710607 VFT0068 - 06</sub> Asp tRNA
2374467 2374587 - 121 59710607 VFR0010 - 5S RNA
2374676 2377566 - 2891 59710607 VFR0011 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2377915 2377990 - 76 59710607 VFT0069 - 04</sub> Glu tRNA
2378059 2379602 - 1544 59710607 VFR0012 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2426708 2426784 - 77 59710607 VFT0070 - 06</sub> Asp tRNA
2426814 2426934 - 121 59710607 VFR0013 - 5S RNA
2427023 2429913 - 2891 59710607 VFR0014 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2430291 2430366 - 76 59710607 VFT0071 - 02</sub> Ala tRNA
2430404 2430480 - 77 59710607 VFT0072 - 14</sub> Ile tRNA
2430551 2432094 - 1544 59710607 VFR0015 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2434498 2434573 - 76 59710607 VFT0073 - 07</sub> Asn tRNA
2434603 2434678 - 76 59710607 VFT0074 - 12</sub> Thr tRNA
2434731 2434806 - 76 59710607 VFT0075 - 17</sub> Phe tRNA
2537274 2537349 + 76 59710607 VFT0076 - 16</sub> Met tRNA
2624710 2624785 - 76 59710607 VFT0077 - 01</sub> Gly tRNA
2624818 2624894 - 77 59710607 VFT0078 - 16</sub> Met tRNA
2624955 2625031 - 77 59710607 VFT0079 - 01</sub> Gly tRNA
2625064 2625140 - 77 59710607 VFT0080 - 16</sub> Met tRNA
2625201 2625276 - 76 59710607 VFT0081 - 01</sub> Gly tRNA
2625309 2625385 - 77 59710607 VFT0082 - 16</sub> Met tRNA
2625457 2625532 - 76 59710607 VFT0083 - 01</sub> Gly tRNA
2716690 2716765 - 76 59710607 VFT0084 - 12</sub> Thr tRNA
2716778 2716852 - 75 59710607 VFT0085 - 01</sub> Gly tRNA
2716888 2716971 - 84 59710607 VFT0086 - 18</sub> Tyr tRNA
2717005 2717080 - 76 59710607 VFT0087 - 12</sub> Thr tRNA
2722606 2722682 - 77 59710607 VFT0088 - 06</sub> Asp tRNA
2722712 2722832 - 121 59710607 VFR0016 - 5S RNA
2722926 2725816 - 2891 59710607 VFR0017 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2726098 2726173 - 76 59710607 VFT0089 - 13</sub> Val tRNA
2726205 2726280 - 76 59710607 VFT0090 - 02</sub> Ala tRNA
2726305 2726380 - 76 59710607 VFT0091 - 10</sub> Lys tRNA
2726383 2726458 - 76 59710607 VFT0092 - 04</sub> Glu tRNA
2726555 2728097 - 1543 59710607 VFR0018 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2728501 2728621 - 121 59710607 VFR0019 - 5S RNA
2728711 2731601 - 2891 59710607 VFR0020 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2731869 2731944 - 76 59710607 VFT0093 - 02</sub> Ala tRNA
2731982 2732058 - 77 59710607 VFT0094 - 14</sub> Ile tRNA
2732129 2733672 - 1544 59710607 VFR0021 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2734077 2734197 - 121 59710607 VFR0022 - 5S RNA
2734291 2737181 - 2891 59710607 VFR0023 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2737466 2737541 - 76 59710607 VFT0095 - 02</sub> Ala tRNA
2737610 2739153 - 1544 59710607 VFR0024 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2834860 2834936 - 77 59710607 VFT0096 - 03</sub> Pro tRNA
2835009 2835084 - 76 59710607 VFT0097 - 09</sub> His tRNA
2835126 2835202 - 77 59710607 VFT0098 - 03</sub> Pro tRNA
2835275 2835350 - 76 59710607 VFT0099 - 09</sub> His tRNA
2835386 2835462 - 77 59710607 VFT0100 - 11</sub> Arg tRNA
2847344 2847462 - 119 59710607 VFR0025 - 5S RNA
2847478 2847554 - 77 59710607 VFT0101 - 12</sub> Thr tRNA
2847616 2847736 - 121 59710607 VFR0026 - 5S RNA
2847825 2850715 - 2891 59710607 VFR0027 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2850983 2851058 - 76 59710607 VFT0102 - 13</sub> Val tRNA
2851090 2851165 - 76 59710607 VFT0103 - 10</sub> Lys tRNA
2851168 2851243 - 76 59710607 VFT0104 - 04</sub> Glu tRNA
2851340 2852883 - 1544 59710607 VFR0028 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2853287 2853407 - 121 59710607 VFR0029 - 5S RNA
2853497 2856388 - 2892 59710607 VFR0030 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2856656 2856731 - 76 59710607 VFT0105 - 13</sub> Val tRNA
2856763 2856838 - 76 59710607 VFT0106 - 10</sub> Lys tRNA
2856841 2856916 - 76 59710607 VFT0107 - 04</sub> Glu tRNA
2857013 2858556 - 1544 59710607 VFR0031 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA
2858960 2859080 - 121 59710607 VFR0032 - 5S RNA
2859169 2862059 - 2891 59710607 VFR0033 - large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA
2862385 2863928 - 1544 59710607 VFR0034 - small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA