ФЭНДОМ


   LOCUS       NC_008268            7804765 bp    DNA     linear   BCT 27-JUN-2007
   DEFINITION  Rhodococcus sp. RHA1, complete genome.
   ACCESSION   NC_008268
   VERSION     NC_008268.1  GI:111017022
   KEYWORDS    .
   SOURCE      Rhodococcus sp. RHA1
     ORGANISM  Rhodococcus sp. RHA1
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Corynebacterineae; Nocardiaceae; Rhodococcus.
   REFERENCE   1  (bases 1 to 7804765)
     AUTHORS   McLeod,M.P., Warren,R.L., Hsiao,W.W., Araki,N., Myhre,M.,
               Fernandes,C., Miyazawa,D., Wong,W., Lillquist,A.L., Wang,D.,
               Dosanjh,M., Hara,H., Petrescu,A., Morin,R.D., Yang,G., Stott,J.M.,
               Schein,J.E., Shin,H., Smailus,D., Siddiqui,A.S., Marra,M.A.,
               Jones,S.J., Holt,R., Brinkman,F.S., Miyauchi,K., Fukuda,M.,
               Davies,J.E., Mohn,W.W. and Eltis,L.D.
     TITLE     The complete genome of Rhodococcus sp. RHA1 provides insights into
               a catabolic powerhouse
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15582-15587 (2006)
      PUBMED   17030794
   REFERENCE   2  (bases 1 to 7804765)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (31-JUL-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 7804765)
     AUTHORS   McLeod,M.P., Warren,R.L., Araki,N., Hsiao,W.W.L., Myhre,M.,
               Fernandes,C., Miyazawa,D., Wong,W., Lillquist,A.L., Wang,D.,
               Dosanjh,M., Petrescu,A., Morin,R.D., Yang,G., Stott,J.M.,
               Schein,J.E., Shin,H., Smailus,D., Siddiqui,A.S., Marra,M.A.,
               Jones,S.J.M., Holt,R., Brinkman,F.S.L., Miyauchi,K., Fukuda,M.,
               Davies,J.E., Mohn,W.W. and Eltis,L.D.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JUL-2006) Microbiology and Immunology, University of
               British Columbia, 1365-2350 Health Sciences Mall, Vancouver, BC V6T
               1Z3, Canada
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000431.
               Bacteria available by contacting Lindsay Eltis (leltis [at]
               interchange.ubc.ca).
               COMPLETENESS: full length.


Расположение РНК Править

Начало Конец Направление Длина PID Ген COG Комментарий
949939 950024 + 86 111017022 RHA1_ro00893 - 15</sub> Leu tRNA
980124 980200 - 77 111017022 RHA1_ro00922 - 03</sub> Pro tRNA
997764 997883 - 120 111017022 RHA1_ro00939 - 5S ribosomal RNA
998011 1001147 - 3137 111017022 RHA1_ro00940 - 23S ribosomal RNA
1001498 1003016 - 1519 111017022 RHA1_ro00941 - 16S ribosomal RNA
1063477 1063550 + 74 111017022 RHA1_ro00999 - 15</sub> Leu tRNA
1264846 1264920 - 75 111017022 RHA1_ro01193 - 13</sub> Val tRNA
1280083 1280159 - 77 111017022 RHA1_ro01209 - 16</sub> Met tRNA
1281843 1281915 - 73 111017022 RHA1_ro01212 - 07</sub> Asn tRNA
1449081 1449157 - 77 111017022 RHA1_ro01374 - 03</sub> Pro tRNA
1449297 1449370 + 74 111017022 RHA1_ro01375 - 01</sub> Gly tRNA
1475561 1475633 + 73 111017022 RHA1_ro01399 - 11</sub> Arg tRNA
1494475 1494550 + 76 111017022 RHA1_ro01419 - 09</sub> His tRNA
1496141 1496213 + 73 111017022 RHA1_ro01421 - 10</sub> Lys tRNA
1509549 1509633 + 85 111017022 RHA1_ro01429 - 15</sub> Leu tRNA
1544486 1544605 - 120 111017022 RHA1_ro01465 - 5S ribosomal RNA
1544737 1547873 - 3137 111017022 RHA1_ro01466 - 23S ribosomal RNA
1548205 1549723 - 1519 111017022 RHA1_ro01467 - 16S ribosomal RNA
1578369 1578444 + 76 111017022 RHA1_ro01494 - 11</sub> Arg tRNA
1618773 1618844 - 72 111017022 RHA1_ro01535 - 19</sub> Cys tRNA
2105387 2105462 - 76 111017022 RHA1_ro01982 - 20</sub> Trp tRNA
2106941 2107013 - 73 111017022 RHA1_ro01986 - 16</sub> Met tRNA
2107059 2107131 - 73 111017022 RHA1_ro01987 - 12</sub> Thr tRNA
2107347 2107429 - 83 111017022 RHA1_ro01988 - 18</sub> Tyr tRNA
2399540 2399612 + 73 111017022 RHA1_ro02272 - 11</sub> Arg tRNA
2482901 2482977 + 77 111017022 RHA1_ro02354 - 16</sub> Met tRNA
3893687 3893760 + 74 111017022 RHA1_ro03682 - 14</sub> Ile tRNA
3893881 3893953 + 73 111017022 RHA1_ro03683 - 02</sub> Ala tRNA
3912642 3912727 + 86 111017022 RHA1_ro03704 - 15</sub> Leu tRNA
4138438 4139956 + 1519 111017022 RHA1_ro03936 - 16S ribosomal RNA
4140307 4143443 + 3137 111017022 RHA1_ro03938 - 23S ribosomal RNA
4143573 4143692 + 120 111017022 RHA1_ro03939 - 5S ribosomal RNA
4337966 4338053 + 88 111017022 RHA1_ro04120 - 08</sub> Ser tRNA
4346329 4346420 + 92 111017022 RHA1_ro04130 - 08</sub> Ser tRNA
4346466 4346541 + 76 111017022 RHA1_ro04131 - 11</sub> Arg tRNA
4365972 4366062 + 91 111017022 RHA1_ro04156 - 08</sub> Ser tRNA
4398265 4398352 - 88 111017022 RHA1_ro04190 - 08</sub> Ser tRNA
4399035 4399126 + 92 111017022 RHA1_ro04192 - signal recognition particle
4542335 4542408 - 74 111017022 RHA1_ro04312 - 03</sub> Pro tRNA
4588706 4588778 + 73 111017022 RHA1_ro04355 - 12</sub> Thr tRNA
4590278 4591796 + 1519 111017022 RHA1_ro04359 - 16S ribosomal RNA
4592147 4595283 + 3137 111017022 RHA1_ro04360 - 23S ribosomal RNA
4595413 4595532 + 120 111017022 RHA1_ro04361 - 5S ribosomal RNA
4991366 4991440 + 75 111017022 RHA1_ro04720 - 12</sub> Thr tRNA
5145867 5145939 - 73 111017022 RHA1_ro04876 - 10</sub> Lys tRNA
5147023 5147095 + 73 111017022 RHA1_ro04878 - 04</sub> Glu tRNA
5147192 5147268 + 77 111017022 RHA1_ro04879 - 06</sub> Asp tRNA
5147332 5147408 + 77 111017022 RHA1_ro04880 - 17</sub> Phe tRNA
5689362 5689435 - 74 111017022 RHA1_ro05339 - 01</sub> Gly tRNA
6060079 6060154 + 76 111017022 RHA1_ro05636 - 02</sub> Ala tRNA
6152131 6152201 - 71 111017022 RHA1_ro05725 - 05</sub> Gln tRNA
6218969 6219045 + 77 111017022 RHA1_ro05781 - 15</sub> Leu tRNA
6890362 6890438 + 77 111017022 RHA1_ro06392 - 16</sub> Met tRNA
6913765 6913837 + 73 111017022 RHA1_ro06417 - 02</sub> Ala tRNA
6994134 6994205 + 72 111017022 RHA1_ro06494 - 05</sub> Gln tRNA
6994282 6994357 + 76 111017022 RHA1_ro06495 - 04</sub> Glu tRNA
7227213 7227285 - 73 111017022 RHA1_ro06714 - 01</sub> Gly tRNA
7388745 7388819 - 75 111017022 RHA1_ro06870 - 13</sub> Val tRNA
7388836 7388908 - 73 111017022 RHA1_ro06871 - 01</sub> Gly tRNA
7388983 7389057 - 75 111017022 RHA1_ro06872 - 13</sub> Val tRNA
7389059 7389129 - 71 111017022 RHA1_ro06873 - 19</sub> Cys tRNA
7389151 7389226 - 76 111017022 RHA1_ro06874 - 01</sub> Gly tRNA
7389469 7389540 + 72 111017022 RHA1_ro06875 - 13</sub> Val tRNA